Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2413 ATGGAACCCCGCGTTGGGAACAAGTTCCGTCTTGGCCGCAAAATTGGAAGCGGATCCTTCGGCGAGATCTATCTCGGTGCGAATATTCAGACAAATGAGGAGGTTGCGATTAAGCTCGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCAAAGTTGTATAAAATACTGCAAGGAGGAACTGAGATCCCAAATGTGAGATGGTTTGGCGTTGAGGGACATTACAATGTCCTTGTGATGGGTTTACTGGGCCCTAGTCTTGAGGATTTATTCAATTTCTGTAGTCGGAAATTGTCCCTGAAAACTGTTCTCTTGCTTGCTGATCAGATGGTGGGATTCCCTGTGTTTTGTAGATACTTTTCTAATTTGCATTTACTGATTTCTTTTTTGAATTTCAAGTTATTATTGAAAATAATTCTCGAATTTTGTGGGGTCTCTCAGAATTTCACTTGTTTCAGAGAGAATAAGAGTTTGACAGGAACTGCTAGATATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGCAGGGACGACTTAGAATCACTTGGATATGTTCTTATGTATTTTTTGAGAGGAAGTCGTCCATGGCAGGGATTGAAAGCAGGTACTAAGAAACAAAAGTATGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTGTGTTGTGGCTACCCCTCAGAGTTTGCTTCATACTTCCTTTACTGTCGGTCACTGCGGTTTGATGATAAACCAGATTACGCTTATTTGAAAAGGCTTTTCTGTGACCTTTTCATTCGTGAAGGACTTCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTGCCAAGCCTCCTGCTTCTCAACACTTGCTGGGTCCCGCTGCTGGACCAAGTTCTGGCATGCCACAAGCTGTTGTCAATGCTGATAGACAGACAGGTGGGGAAGACCGTAGACATACTGGTTGGTCTTCAGCAGATCCTACTCAAAGAAGAAATTCTGGACCTATTGCAAATGATGTAATATTATCAAGACAAAAAGGCCCTTTTACAAATAACTCAACTGGATCTAAAGATGTTATGTTGTCTAGTTCTAATTTCTTGTGGTCAAGTGGATCTACAAGGCGAGGTGCTGTATCCAGCAGTCGCGATGCAGTTGTTGGCAACGAGACTGAGCCCCCTCATCCTCTCACCAGGGATGCTACTCAAGGAGCACTCCGAAAAATCTCTGGGGCTCAAAGAAGTTCTCCTATCATGCCATCGGAGCACAACCGAACATCCTCAGCCAGAAATACGTCAAACATGAAGAATTTTGAGTCAACTCTCCGAGGTATTGAGAGCCTGAATTTCAACGACGGGAGGGTACAGTATTAG 1389 0.4226 MEPRVGNKFRLGRKIGSGSFGEIYLGANIQTNEEVAIKLESVKTKHPQLLYESKLYKILQGGTEIPNVRWFGVEGHYNVLVMGLLGPSLEDLFNFCSRKLSLKTVLLLADQMVGFPVFCRYFSNLHLLISFLNFKLLLKIILEFCGVSQNFTCFRENKSLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSRPWQGLKAGTKKQKYEKISEKKVSTSIESLCCGYPSEFASYFLYCRSLRFDDKPDYAYLKRLFCDLFIREGLQFDYVFDWTILKYQQSQIAKPPASQHLLGPAAGPSSGMPQAVVNADRQTGGEDRRHTGWSSADPTQRRNSGPIANDVILSRQKGPFTNNSTGSKDVMLSSSNFLWSSGSTRRGAVSSSRDAVVGNETEPPHPLTRDATQGALRKISGAQRSSPIMPSEHNRTSSARNTSNMKNFESTLRGIESLNFNDGRVQY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2413 462 MobiDBLite consensus disorder prediction 377 439 - -
Apr2g2413 462 PANTHER CASEIN KINASE-RELATED 1 446 - -
Apr2g2413 462 ProSiteProfiles Protein kinase domain profile. 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2413 462 MobiDBLite consensus disorder prediction 413 439 - -
Apr2g2413 462 Gene3D Transferase(Phosphotransferase) domain 1 142 296 - -
Apr2g2413 462 Gene3D Phosphorylase Kinase; domain 1 2 85 - -
Apr2g2413 462 SMART serkin_6 9 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2413 462 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Apr2g2413 462 MobiDBLite consensus disorder prediction 293 362 - -
Apr2g2413 462 MobiDBLite consensus disorder prediction 331 362 - -
Apr2g2413 462 MobiDBLite consensus disorder prediction 377 392 - -
Apr2g2413 462 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 446 IPR030509 GO:0004672|GO:0005524
Apr2g2413 462 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2413 Apr-Chr2 28740504 28746023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2413 K02218 - gmx:100795570 681.019