Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2389 ATGCAAATGCTCTGTAAGGCTTCGTCTGCTATGGCCACTTTTCCTTGCTCTAGGGTACCTTGCTTAAAGGACAATTATGCATATCTCTTACATGATGTGGGTACGGGTACAGTTGGTGTTGTTGATCCTTCTGAGGCTGTGCCTGTGATAGATGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCACCATCATCATGATCACACTGGTGGAAATGTAGAATTGAAAACAAAATATGGGGCAAAGGTGATTGGTTCAGGAGCTGACAAGGCAAGGATTCCTGGCATTGACATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCACGAGGTGCGTGTAATGGACACACCTGGTCACACCCAAGGCCATATAAGCTTCTACTTTCCTGGATCTGGGGCAATTTTTACTGGAGACACTTTGTTCAGCTTATCATGTGGCAAGCTCTTTGAAGGAAGCCCTCAGCAGATGCTATCTTCTCTTAAAAAGATCATGTCTTTGCCAGACGACACATATATATACTGTGGACATGAATATACATTGAGTAATACAAAGTTTGCATTGTCTATTGAACCTGAAAACAAGGAACTTCAATCCTACGCTGCTCATGTAGCTTACCTTCGAAGTAAAGGCTTGCCTACAATTCCCACCACCCTGAAGATGGAAAAGGACTGTAATCCATTCCTTCGTACATCTAGTCCACAAATCCGGCACTCATTAAACATTGCAGCCACAGCAGATGATGCAGAAGCCCTGGGTGTCATTCGACGAGCAAAAGATAATTTTTAG 804 0.4303 MQMLCKASSAMATFPCSRVPCLKDNYAYLLHDVGTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNVELKTKYGAKVIGSGADKARIPGIDIYLNDGDKWMFAGHEVRVMDTPGHTQGHISFYFPGSGAIFTGDTLFSLSCGKLFEGSPQQMLSSLKKIMSLPDDTYIYCGHEYTLSNTKFALSIEPENKELQSYAAHVAYLRSKGLPTIPTTLKMEKDCNPFLRTSSPQIRHSLNIAATADDAEALGVIRRAKDNF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2389 267 Gene3D - 16 267 IPR036866 -
Apr2g2389 267 SMART Lactamase_B_5a 24 182 IPR001279 -
Apr2g2389 267 Hamap Hydroxyacylglutathione hydrolase [gloB]. 14 267 IPR017782 GO:0004416|GO:0019243
Apr2g2389 267 Pfam Hydroxyacylglutathione hydrolase C-terminus 183 267 IPR032282 -
Apr2g2389 267 Pfam Metallo-beta-lactamase superfamily 27 182 IPR001279 -
Apr2g2389 267 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 18 267 IPR017782 GO:0004416|GO:0019243
Apr2g2389 267 PIRSF Glx 9 267 IPR017782 GO:0004416|GO:0019243
Apr2g2389 267 CDD hydroxyacylglutathione_hydrolase_MBL-fold 18 182 IPR035680 -
Apr2g2389 267 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 14 267 - -
Apr2g2389 267 PANTHER BETA LACTAMASE DOMAIN 14 267 - -
Apr2g2389 267 SUPERFAMILY Metallo-hydrolase/oxidoreductase 19 267 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2389 Apr-Chr2 28576280 28579587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2389 K01069 - gmx:100819370 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2389 2 28576280 28579587 Apr2g2389 2 28576280 28579587 ECH
Apr2g2389 2 28576280 28579587 Apr5g0230 5 2085678 2089590 PCT