Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2380 ATGGCGTTGAACAATGGCCTGCCAGCCACCGGCAACGGTCTCATCGTCAGCTTCGGCGAGATGCTAATCGATTTCGTTCCCACCGTCTCCGGCGTGTCCCTGGCGGAGGCACCGGGCTTCCTCAAGGCCCCCGGCGGAGCCCCGGCGAACGTCGCCATCGCCGTTTCTAGACTCGGCGGCAAATCGGCCTTCGTCGGCAAGCTCGGCGACGACGAGTTTGGTCACATGCTCGCCGGAATCCTTAAGGAGAACGGCGTCCGGTCCGACGGCATAACCTTCGACCAAGGCGCACGCACTGCTTTGGCCTTCGTGACTCTACGCGCCGACGGGGAGCGTGAGTTTATGTTCTACAGAAACCCCAGCGCTGACATGCTTCTTCAACCCGAAGAACTGAACCTCGAACTCATCAGATCTGCAAAAGTTTTCCATTATGGGTCGATAAGCTTGATCGTGGAGCCATGCAGATCGGCACACCTGAAGGCAATGGAAGTTGCCAAAGAGGCTGGTTGCTTGCTCTCCTATGATCCAAACCTTCGTCTGCCGTTGTGGCCCTCGGCCGAGGAAGCCCGAAAGCAAATACTCAGCATATGGGAAAAGGCTGATTTGATTAAGGTCAGTGATGTGGAGCTTGAGTTCCTCACCGGAAGTGACAAAATTGATGATGCTTCTGCTCTGTCATTGTGGCACCCCAATTTGAAGTTACTCCTTGTCACTCTTGGGGAGCATGGTTCCAGATACTACACCAAGAATTTTCATGGATCAGTAGATGCATTTCATGTCAATACAGTTGATACAACTGGCGCCGGTGATTCCTTTGTTGGTGCTCTACTGACCAAGATTGTCGATGATCAGTCTATCCTTGAAGATGAATCAAGGTTAAGAGAAGTACTCAAGTTTGCAAATGCATGTGGAGCAATTACAACTACTAAAAAGGGAGCAATCCCCGCCCTTCCCAAAGAGGAGGATGCTCTCAAACTCATCAAAGGGGCATAA 993 0.5227 MALNNGLPATGNGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKSAFVGKLGDDEFGHMLAGILKENGVRSDGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLQPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSAEEARKQILSIWEKADLIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTLGEHGSRYYTKNFHGSVDAFHVNTVDTTGAGDSFVGALLTKIVDDQSILEDESRLREVLKFANACGAITTTKKGAIPALPKEEDALKLIKGA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2380 330 PANTHER BNAA04G18320D PROTEIN 20 319 - -
Apr2g2380 330 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Apr2g2380 330 Gene3D - 13 330 IPR029056 -
Apr2g2380 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Apr2g2380 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Apr2g2380 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Apr2g2380 330 PANTHER HEXOKINASE FAMILY MEMBER 20 319 - -
Apr2g2380 330 CDD bac_FRK 14 314 - -
Apr2g2380 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Apr2g2380 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Apr2g2380 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2380 Apr-Chr2 28524873 28528517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2380 K00847 - gmx:100803713 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2380 2 28524873 28528517 Apr2g2380 2 28524873 28528517 ECH
Apr2g2380 2 28524873 28528517 Apr5g0222 5 2027987 2031273 PCT