Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2224 ATGGCCAAAGGTGCTTCTCAGTCTCAGTCCTCCACTTCCACCAACACGCGACCAGGAATGGTGGCTCCACGCGGCTCTGCTGCCGCCACCGCTGGCATGCGCCGCCGTCGTATCGGCGGAGGAAACAACTCCGGCAGTGTCGGAGGAGGCGCCGGCGCCGGCGCCGGAAGCAACATGCTGAGGTTCTACACGGACGATGCCCCGGGGCTGAAGATTTCGCCGACGGTGGTGCTTGTGATGAGCCTCTGCTTCATCGGCTTCGTCACGGCCCTCCACGTGTTCGGAAAACTCTACCGCTACAAATCTGGTCCTGGCGTTTGA 321 0.6262 MAKGASQSQSSTSTNTRPGMVAPRGSAAATAGMRRRRIGGGNNSGSVGGGAGAGAGSNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYKSGPGV* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2224 106 Pfam Sec61beta family 56 95 IPR016482 -
Apr2g2224 106 MobiDBLite consensus disorder prediction 1 51 - -
Apr2g2224 106 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 103 - -
Apr2g2224 106 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g2224 106 PIRSF Sec61_beta 10 103 IPR030671 GO:0005784|GO:0006886
Apr2g2224 106 PANTHER SEC61 SUBUNIT BETA 1 103 IPR030671 GO:0005784|GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2224 Apr-Chr2 27343274 27343944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2224 K09481 - egr:104421678 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2224 2 27343274 27343944 Apr3g1385 3 28312131 28312949 PCT