Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2008 ATGGCTTCTAGAGGCCTCAAAACTTGCTTGGCTGTGTCTCTACTCTTCTTGATCATTTTTACCATCGTGATTGTGACCTTGTTTCTCACCATCTTTAAACCCAAGGATCCTGACGTCAATGTTCACCCACTTGGCCTCGAACATATTCAATTTTCCCTTTTACTCAATTTGACCATGAATGTGTCTCTAGGCATGATGATCACTATAGAGAATCCAAATTATGGAAGCTTCGAGTACACAAACTCCACAGGTTATATCAATTTTCATGATACAGTTGTTGCCTGTGTTCCAATGGAGGCAGCGTTAGTCCCAGCGCGTAGCGTTATTAATGTGAACACTACTGCAGATTTTATGGTAGGAAAGTTGGTGCTTGATCCCAATTTTTGGCCTGATGCTTTTACTGGGACCTTGAATTTTACGTCAACAGCTACACTACATGGGAAAGCGCGCGTGCTTAAGATTATCAAATTGAAGGCCACGGCTTATAGCTCATGTGACATCTCTCTTCATATAAGCTCTAGGGTTGTTGATACCAAATGCATATCCAAAATCAAGCTTTGA 561 0.4135 MASRGLKTCLAVSLLFLIIFTIVIVTLFLTIFKPKDPDVNVHPLGLEHIQFSLLLNLTMNVSLGMMITIENPNYGSFEYTNSTGYINFHDTVVACVPMEAALVPARSVINVNTTADFMVGKLVLDPNFWPDAFTGTLNFTSTATLHGKARVLKIIKLKATAYSSCDISLHISSRVVDTKCISKIKL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2008 186 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 3 185 - -
Apr2g2008 186 Pfam Late embryogenesis abundant protein 67 159 IPR004864 -
Apr2g2008 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2008 Apr-Chr2 25412479 25413039 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2008 - - gmx:100800442 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2008 2 25412479 25413039 Apr3g1146 3 26012421 26013056 PCT