Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1757 ATGGCACCCAATAAATCATCCGACTCTGATGATGTAATTGATGAAACACAAGTAAAGATCTTTCGACATGGAAAGTCAGTACATCAAATTCTCGGGGAAGGAGAAGTGGCAGATATATTATTATGGAGGAATAGAAATATATCAGCCGCGTTTCTGCTTGGGATGACAACAATTTGGTTTCTATTTGAGGTTGTTGAGTACAATTTTGTGACCCTTATTTGTCACATTTCCATCACCACAATTCTTGTAGTCCACATATGGTCCATTGTTGCAGATATCATGAGATGGAATGGGCCCCGGGTCCTGGAAACTATTTTACAAGATTATTCCTTCTTTCAGCATCTTGCTACTATTTTACACACAAGATCTAACCAATTGTTAAGAATGGTCCTCTACATTTCATGTGGAACAGAACTACCATCCTTTCTTCTGATCATCTTTTTCCTCTATATATTGTCACTGATAGGAACCTACTTCAGCTTTGTTAGTTTGCTATATATTGGTTTTCTTTGCATTCAAACACTGCCAATTGTATATGATCACTATAAGGAAGAAATTAACAATCTGGTTGAACATATCATAATGGACCTCCAGAAAAAATATAGAAGATTTAAGAAGAGATATCTCAACAAAATTCCCCGAGGACCAGTGAAAGAAAAGAAAACCATATAA 672 0.3601 MAPNKSSDSDDVIDETQVKIFRHGKSVHQILGEGEVADILLWRNRNISAAFLLGMTTIWFLFEVVEYNFVTLICHISITTILVVHIWSIVADIMRWNGPRVLETILQDYSFFQHLATILHTRSNQLLRMVLYISCGTELPSFLLIIFFLYILSLIGTYFSFVSLLYIGFLCIQTLPIVYDHYKEEINNLVEHIIMDLQKKYRRFKKRYLNKIPRGPVKEKKTI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1757 223 Pfam Reticulon 36 192 IPR003388 -
Apr2g1757 223 PANTHER RETICULON 5 221 IPR045064 GO:0009617
Apr2g1757 223 ProSiteProfiles Reticulon domain profile. 36 223 IPR003388 -
Apr2g1757 223 PANTHER RETICULON-LIKE PROTEIN B9 5 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1757 Apr-Chr2 23224018 23226114 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1757 - - gmx:100809028 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1035 6 15077407 15079046 Apr2g1757 2 23224018 23226114 ECH
Apr2g1757 2 23224018 23226114 Apr2g1757 2 23224018 23226114 ECH