Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1620 ATGGACAACAGTTACACTCTCTTCCTCAGTTCTCCTCTCGCGATGGCTCCATCCGTTAAACGATGCCGTTTCAGTTGCTGTGCCAAAGCGCAACAGCTCCAAGAAATTCGGGTGTGCACGAACCGCACGTGCCGCAGACAGGGCTCATTTCAGACCCTAGAAACCCTCTCTGGCCTCGCTCCGCCAAACGTCGACGTAAAGTCCTGCGGTTGCTTGGGGCGGTGCGGCGGCGGCCCCAACTTGGCGGTCCTCCCTGACGGCCTCATCGTCGGCCATTGCGGTACAGCTGCTCGTGCGGCGGAGGTCATGGCGGCTCTCTTCGCCGGCGGCTATGACGCCAAGTGTTGTTTGGATGCGCTTGCTTTGAGGAAGAGAGCGGATGTTGAATTTGCGAAGGGAAATTTCGCTGATGCTGAGCTTCTTCTCTCACAGGCTATAGATTTAAAACCTTTTGGTGGCATACATGTCATTTTCAAATGCAGGTCATTTGTAAGGCTGGAATTGGGTAACTACTCTGGTGCCCTTGAGGATGCTAGGGAGGCTTTGGCATTAGCTCCCGGCTATTCTGAGGGTTATATTTGCCAAGGTGATGCCTTTTTGGCATTGAACAAATTTGATTTGGCAGAGCAGTCATATTTAGCATCTATCGATATTGATTCTTCAATTCGTCATTCTAAATCATTCAAGGCTCGGATATCAAAACTTCAGGAAAAACTTGCTGCTGTCAATACACCATAA 738 0.5054 MDNSYTLFLSSPLAMAPSVKRCRFSCCAKAQQLQEIRVCTNRTCRRQGSFQTLETLSGLAPPNVDVKSCGCLGRCGGGPNLAVLPDGLIVGHCGTAARAAEVMAALFAGGYDAKCCLDALALRKRADVEFAKGNFADAELLLSQAIDLKPFGGIHVIFKCRSFVRLELGNYSGALEDAREALALAPGYSEGYICQGDAFLALNKFDLAEQSYLASIDIDSSIRHSKSFKARISKLQEKLAAVNTP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1620 245 Gene3D Tetratricopeptide repeat domain 117 244 IPR011990 GO:0005515
Apr2g1620 245 Gene3D Glutaredoxin 33 114 - -
Apr2g1620 245 SUPERFAMILY Thioredoxin-like 36 110 IPR036249 -
Apr2g1620 245 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 15 244 - -
Apr2g1620 245 SMART tpr_5 189 222 IPR019734 GO:0005515
Apr2g1620 245 SMART tpr_5 119 152 IPR019734 GO:0005515
Apr2g1620 245 SMART tpr_5 155 188 IPR019734 GO:0005515
Apr2g1620 245 SUPERFAMILY TPR-like 118 238 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1620 - - gmx:100813823 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1620 2 21927373 21930655 Apr2g1620 2 21927373 21930655 ECH