LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr2g1594	ATGGATGCTGCAAAAGTTAGAGAGCTAAAGCAATTCATAGAGGCATGCAAATCCAATCCTTCACTTCTCCACAGCCCTTCTCTTTCCTTCTTCAAGTCTTATCTTCTCAGCCTCGGTGCTCGCATCCCTCCCCAGCCCAAAACGGAACCAGAGGATTATGATGAGAAGAAGCCGCATCCTTATTCATTCGCACAAGATGAACATGACATTGTAGAATCTGATATAGAGTTGGATGATGCTGATGTTGTTGAACCTGATAATGACCCTCCTCAAAAGATGGGTGATCTTTCTGCTGAAGTAACGGATGAACAGAGGGATGCTGCACAAATAGCAAAATCAAAAGCAGTTGATGCTATATCACAAGGTATGTTGGACAAAGCACTGGACCAACTGACAGAAGCCATTTTGTTGAATCCGCATTCAGCTATACTTTATGCTACTAGAGCTAGTGTTTTTATGAAATTGAAGAAACCAAATGCTGCTATCCGCGATGCTGACACTGCCGTGAAGATTAATCCGGATTCGGCTAAAGGATTCAAAATACGAGGAATGTCAAGGGCTATGTTGGGACTATGGGAAGAAGCAGCAGGTGACCTTCGTGTGGCTTCAAAGTTAGATTACGATGAAGAGATTGCGATGGCACTTAAAAAGGTTGAACCTAATGCGCACAAAATTGCGGAGCATAGGAGAAAATATGAACGGTTAAGAAAGCAAAAGGAGCATAAAAGAGTTCAATCAGTTCATATTAAGAAGGAGCAACAAACTGAAGCCTCAGTTGAAGAAGCATTATCTGTTTTAAAAGATGGGCAAGTCATTGCTATTCACTCTACTGATGAAATGGAGTCGAAGCTGAGTGCTGCGTCAAAGACATCACGCTTGGTGATCCTGTATTTTACTGCAACATGGTGTGGCCCTTGCCGTTTCATCTCGCCTATTTATACAAGCTTGGCTGAAAAGTACCCAAAAGTGGTTTTCCTGAAAGTTGACATAGATGAGGCAAGGAATGTTGCTGCCCGCTGGAATATTAGCAGTGTTCCTACATTTTTCTTTGTTAAAAATGGCAAGGAGATTGACAGTGTGGTGGGGGCGGACAAAAGTACACTTGAAAGGAAGATTGAGCAACATGCTGGCCTTCTTTAA	1140	0.4254	MDAAKVRELKQFIEACKSNPSLLHSPSLSFFKSYLLSLGARIPPQPKTEPEDYDEKKPHPYSFAQDEHDIVESDIELDDADVVEPDNDPPQKMGDLSAEVTDEQRDAAQIAKSKAVDAISQGMLDKALDQLTEAILLNPHSAILYATRASVFMKLKKPNAAIRDADTAVKINPDSAKGFKIRGMSRAMLGLWEEAAGDLRVASKLDYDEEIAMALKKVEPNAHKIAEHRRKYERLRKQKEHKRVQSVHIKKEQQTEASVEEALSVLKDGQVIAIHSTDEMESKLSAASKTSRLVILYFTATWCGPCRFISPIYTSLAEKYPKVVFLKVDIDEARNVAARWNISSVPTFFFVKNGKEIDSVVGADKSTLERKIEQHAGLL*	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr2g1594	379	Pfam	Thioredoxin	281	373	IPR013766	-
	Apr2g1594	379	SUPERFAMILY	TPR-like	102	214	IPR011990	GO:0005515
	Apr2g1594	379	Gene3D	Glutaredoxin	256	376	-	-
	Apr2g1594	379	PANTHER	HSC70-INTERACTING PROTEIN	1	377	-	-
	Apr2g1594	379	Gene3D	Tetratricopeptide repeat domain	69	242	IPR011990	GO:0005515
	Apr2g1594	379	PANTHER	TPR REPEAT-CONTAINING THIOREDOXIN TDX	1	377	-	-
	Apr2g1594	379	SUPERFAMILY	Thioredoxin-like	241	376	IPR036249	-
	Apr2g1594	379	CDD	TRX_family	284	373	-	-
	Apr2g1594	379	SMART	tpr_5	142	175	IPR019734	GO:0005515
	Apr2g1594	379	SMART	tpr_5	176	209	IPR019734	GO:0005515
	Apr2g1594	379	SMART	tpr_5	108	141	IPR019734	GO:0005515
	Apr2g1594	379	ProSitePatterns	Thioredoxin family active site.	295	313	IPR017937	-
	Apr2g1594	379	Gene3D	-	1	44	-	-
	Apr2g1594	379	MobiDBLite	consensus disorder prediction	47	61	-	-
	Apr2g1594	379	Coils	Coil	225	245	-	-
	Apr2g1594	379	MobiDBLite	consensus disorder prediction	42	61	-	-
	Apr2g1594	379	CDD	Hip_N	3	43	IPR034649	GO:0046983
	Apr2g1594	379	ProSiteProfiles	Thioredoxin domain profile.	251	377	IPR013766	-
	Apr2g1594	379	Pfam	Hsp70-interacting protein N N-terminal domain	2	43	IPR034649	GO:0046983

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr2g1594	Apr-Chr2	21697882	21709113	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr2g1594	K09560		-	gmx:100789778	598.201

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr2g1594	2	21697882	21709113	Apr2g1594	2	21697882	21709113	ECH