LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr2g1587	ATGGGAATGGGGGATGATTACAAGTTTTTGCGACTTCGAGATGCGTATTCATCTATCAACCAGAAAGTTAACATGATTGCCGTCATTCTTGAGTTCGGCTTCCCAAGGCCAACTAGAGGCACTGATTACTGCTGTTCCGTACGAATAATTGATGAAACACATCATGAAACCGGCATGGCTGTTAACATTTTTGCTGAAAATGCTGAAAGACTTCCTCATGTTGCTGCTGCTGGGGATGTAATTCAGCTTTGTCATGTTGCGGTAAAAGCACATGGTGGGGAAGTAAATGCCGTTTTCAACAAAAAATTCTCCTCTTTTGCTTTATATAAAGGGGAAGATGGTGATGATTTTGCCCCATATCAAGTTTCTTCTAAATTTCACCCCAGAGATGAGGACAAGGGGTTCATAGATAAGCTTAGAAAATGGCTGGTCAATCTTCGGCTTCAGGATGATCCGAGTAATTTTCCTATGTTAGGAGAAATCAAGGAAGGAAATCACATCAATTTGGCATGCAAGATACTTCATTGCTGCGGGGCTGCAAAAGATCAATGGTTTATGTATGCTTGGGATGGTAGTGATACCCCACCAAATGCCATATGGTCAAAGCTAGAAGATGAAATTAATGATTCGCTCCCATTACAACTGGAACCTTTGTCTCTGCCAAGGGATTTATTATGTACTTTTCCTACTGTTGGATCCATCTTGAGGATAACTTTTGATTTAGGTATTGAGAACAATCATTTCCACCTTCTAAACGTTGGTAAATGGGTCAAGTTTGTCAATATACGTCTTGAGGTGCATTCTGGACTGTGGCGTGGTGTTTTTACCTCTTTTACGAAGCTTCGATATACATCTAATGAGGACTGTCTCATTGGAGAACGCCAAAGATTGTCTGATGAGCGGATATCCTTGAAATCTAGAAGAATACCTTCTTGCAGCTTCTCTGTGCCGTCATGTATTACAGAGGTTAATCATGATCTTGCAACACCTGTTACTTTAATGGATGTCCTCACTCATTCAGAGGTGACAGCTAAATTCAAGTGCCTTGTTCGTGTGGTAGCAGCAATGCCATGCCAAGCAGACAGTCTCTGCTCTCCTGCTGGGATATACAGAATGCGGCTAACCCTAGAGGATCCAACAGCGAGGATCCATGCTTTTGTAGTTGCTGAGGATGGGGAGACCCTTTTTGATGGTTATCCAGGCATTTACAAGTTGACAATGAAGCTTAACAGATTGCTTGGAGTAGCTGAATGTGATGATAGTACTGGGGTGAAGGATACTCCAAGAAATCCACCATGGGTTTTTATTTGTCTCAAGTCATACTATATCTCAAAAACCGAGGCCTGGGGCAGTCGGCACTTCAGAATATTTGACACCAAAATAGTGGGAGATTCATGA	1398	0.4206	MGMGDDYKFLRLRDAYSSINQKVNMIAVILEFGFPRPTRGTDYCCSVRIIDETHHETGMAVNIFAENAERLPHVAAAGDVIQLCHVAVKAHGGEVNAVFNKKFSSFALYKGEDGDDFAPYQVSSKFHPRDEDKGFIDKLRKWLVNLRLQDDPSNFPMLGEIKEGNHINLACKILHCCGAAKDQWFMYAWDGSDTPPNAIWSKLEDEINDSLPLQLEPLSLPRDLLCTFPTVGSILRITFDLGIENNHFHLLNVGKWVKFVNIRLEVHSGLWRGVFTSFTKLRYTSNEDCLIGERQRLSDERISLKSRRIPSCSFSVPSCITEVNHDLATPVTLMDVLTHSEVTAKFKCLVRVVAAMPCQADSLCSPAGIYRMRLTLEDPTARIHAFVVAEDGETLFDGYPGIYKLTMKLNRLLGVAECDDSTGVKDTPRNPPWVFICLKSYYISKTEAWGSRHFRIFDTKIVGDS*	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr2g1587	465	SMART	Telo_bind_a_2	9	144	IPR011564	GO:0000723\|GO:0000781\|GO:0003677
	Apr2g1587	465	SUPERFAMILY	Nucleic acid-binding proteins	158	268	IPR012340	-
	Apr2g1587	465	Gene3D	-	8	151	IPR012340	-
	Apr2g1587	465	PANTHER	PROTECTION OF TELOMERES 1	5	462	IPR028389	GO:0000723\|GO:0043047
	Apr2g1587	465	SUPERFAMILY	Nucleic acid-binding proteins	8	147	IPR012340	-
	Apr2g1587	465	CDD	hPOT1_OB1_like	7	142	-	-
	Apr2g1587	465	Pfam	Telomeric single stranded DNA binding POT1/CDC13	9	143	IPR011564	GO:0000723\|GO:0000781\|GO:0003677

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr2g1587	-		-	gmx:100800003	583.948

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr2g1587	2	21660256	21665878	Apr2g1587	2	21660256	21665878	ECH