Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1541 ATGATTTACGACACAATATTTGCCAAAAGCTTTAGTCGTTATGAGCAGAAAAGGTTGGGATATGGAGCATTTGTTAGCTTCTTGCTCATAGTTTTGAGTCTTTGTACTGTGTTTAAGCCTTACTTGGGTCCTATACATGATTTGAACTTGAAGCTCTTCATCGGAGTTAACACCAAAATGCTGATGGTCAATGACACAAGAAGCTCTTCACAAATAGCCAAAGTTGAAGACATTGTAGCCGAAATTCTTGTTAAAGGCACTGGCAGTTCTCCCCAAATGGATAAAGTTGGAGAAATAGAAACAAAGAAAAAGGAGCTACTGTGCACTTCAGAAGAAAGAACAGAATTTTGCCAAACTCGTGGAGATATCAGAGTCCATGGAAAATCCTCCACTGTTTTCATTGTTTCATCTAACACAACCATGTTAGCACAAAACATTTCCTTGAGCATAAAGCCTTATGCACGAAAGGACGACGTAGATGCAATGAATCGTGTAAGAAAATGGTCACTGAAAGCAGTAAAAATTGGCAAGGAAGTCCCCAAATGCACTCAAAATCACAGCATTCCAGCTGTAATATTTTCCACTGGAGGCTATGTTGGCAACCACTTCCATGAATTCACTGACATTGTTATTCCACTGTTTTTGACTTCTAGACGATTCAATGGAGAAGTACAGTTGATCATAACGAATAACCGCCCTTGGTGGATTTTAAAGCACAAAGCACTTCTTAAGAAGCTGTCAAACTATAAGATTATGGACATTGATAGTGACAATGAAGTTCATTGTTTTCCAAGGGTGATTGTTGGTCTCAAACGGCACCATAAAGAACTAAGCATTGACCCTCAAAAGTACTTCTATTCTATGAAAGACTTCAGGGATTTATTGAGAAGTTCCTATTCATTGAAGAGAGTTGAAGCAATCAAAATCAAAGATGGTCGAAGTGGGAAGCCAAGGCTCATGATTCTTTCAAGAAAGAGATCAAGATCCTTCACTAACACAGCTCAAATAGCGAAAATGGCTGAGAGTTTGGGTTTTGATGTGATTATTAAGGAAGCAGGGGGCAGCATGTGGGGCTTTGCAAATGCTGTGAATTCTTGTGATGTGTTATTGGGAGTGCATGGTGCTGGTCTCACTAACATGCTTTTCCTTCCAGATAATGCAGTTTTCATCCAAGTGGTGCCTTATGGAGGGTTTGCATTGGACTGGCTTGCCACAAATGACTTTGGAAAGCCCTCAAAGGAAATGAGCTTAACGTACTTGGAATACAAAATAAGGTTGGAAGAAAGCACTCTTATACAACAGTATCCACTGGATCATATGCTATTAAAGGATCCCCCATTAATTGGTAAAATAGGATGGGAAACATTTAAGTCTGTGTATTTGGACAAGCAAAATGTAAATCTTGATGTTATTAGGTTTAGGCCAACATTGCAAAAAGCCCTTGAGCTAATGCATCAATAA 1461 0.3908 MIYDTIFAKSFSRYEQKRLGYGAFVSFLLIVLSLCTVFKPYLGPIHDLNLKLFIGVNTKMLMVNDTRSSSQIAKVEDIVAEILVKGTGSSPQMDKVGEIETKKKELLCTSEERTEFCQTRGDIRVHGKSSTVFIVSSNTTMLAQNISLSIKPYARKDDVDAMNRVRKWSLKAVKIGKEVPKCTQNHSIPAVIFSTGGYVGNHFHEFTDIVIPLFLTSRRFNGEVQLIITNNRPWWILKHKALLKKLSNYKIMDIDSDNEVHCFPRVIVGLKRHHKELSIDPQKYFYSMKDFRDLLRSSYSLKRVEAIKIKDGRSGKPRLMILSRKRSRSFTNTAQIAKMAESLGFDVIIKEAGGSMWGFANAVNSCDVLLGVHGAGLTNMLFLPDNAVFIQVVPYGGFALDWLATNDFGKPSKEMSLTYLEYKIRLEESTLIQQYPLDHMLLKDPPLIGKIGWETFKSVYLDKQNVNLDVIRFRPTLQKALELMHQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1541 486 Pfam Glycosyltransferase 61 287 388 IPR007657 GO:0016757
Apr2g1541 486 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 2 102 - -
Apr2g1541 486 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 101 486 - -
Apr2g1541 486 PANTHER GLYCOSYLTRANSFERASE 101 486 IPR007657 GO:0016757
Apr2g1541 486 PANTHER GLYCOSYLTRANSFERASE 2 102 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1541 Apr-Chr2 21304831 21307009 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1541 - - gmx:100805608 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1541 2 21304831 21307009 Apr2g1541 2 21304831 21307009 ECH