Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1531 ATGGCCACCACCCTTTCCTTTTCCCTCTCCACACCCTTCCCAAAGTTCCAAACTTTACCATCCCCACAACAACCCAGAAGAGTATCGTGCTGTCTCAACTCCAACCACTCTCTCCGAGTGGTGTTCTGCGGCGGCGCCACCGGCAGCCACGTGTACCCGGCGGTGGCGATCGCCGAGGAACTGAAAACGGCGAACCCCACGTGCGAGTTCCTCTTCATCGGCACACCCAATAGCATGGAAAGCGATGCAATCTCCTCCGCAGGCTATAACTTTGTCTCTGTTTCACCACCCAATTTCCCTCACCGTTTCTTCGTGTCCCTTTATCAATGCCTCAATCACCTTCGAGATTTCCAACCCCACGTTGTTGTCGGCACAGGTGGACATGTGTCTTTCCCTGTTTGTCTTGCTGCTAAGCTCAGAGGCATAAACCTCGTCATCCACGAACCCAATTCTGTCCCTGCTTTGCCCAACTCTGTTCTTTCCTTCTTTGCTGATGCTATTTTCGTTGCTTTTAATTCTACCCTTGATAGCTTTCCCAGGAACAAGTGTGTGGTGTGTGGGAACCCTGTGAGATTGTCTCTTAGGAACCTTGTTTCTAAGGTGAAGGCAAGGTCTCATTTTTTTGCTGGTTCTGATTCTGAAGAAGGAAAAGTTTTGTTGGTGCTTGGTGGGTCTTTTGGTGCTAATGCGGTTAATATTGCAATGCTGAATTTGTATTATGAGATGCTGAGACAGGATAGTGGCTTGTATATTATATGGCAAACTGGGGTTGAAGTGTTTGATGAGATGGATAGTCTTGTTAAAAATCATCCTCGCTTGCATATGACACCGTTCATGTATTGTATGGATTTGGCATATGCAGCTGCAGACTTGATTGTTTCTAGAGCAGGTGCAATGACTTGCTATGAAATATTGGCGACTGGAAAACCATCTATCCTGATACCATCACCAAATTTCTCCGAGGGGAATCAATTCAGAAATGCTTCCTTGATGGCAGACTTGGCTGGTGTGAAAGTTATAACTGAGGATGAGCTTGACTCAACTACACTTGCCATTGCAATTGAAGAGATTTTAAGAGACAAGAAGAAGATGGAAGATATGTCTGAGAGGGCTCTTAAAGCTGCAAATCCCAATGCCTCAGCTGAGATTGCAAAACACATACTCTCTCTTGTAAATCAATCAACCAAAAAGAAAAGAAATGACCACAAAGTAGAATCTTAG 1221 0.4545 MATTLSFSLSTPFPKFQTLPSPQQPRRVSCCLNSNHSLRVVFCGGATGSHVYPAVAIAEELKTANPTCEFLFIGTPNSMESDAISSAGYNFVSVSPPNFPHRFFVSLYQCLNHLRDFQPHVVVGTGGHVSFPVCLAAKLRGINLVIHEPNSVPALPNSVLSFFADAIFVAFNSTLDSFPRNKCVVCGNPVRLSLRNLVSKVKARSHFFAGSDSEEGKVLLVLGGSFGANAVNIAMLNLYYEMLRQDSGLYIIWQTGVEVFDEMDSLVKNHPRLHMTPFMYCMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNFSEGNQFRNASLMADLAGVKVITEDELDSTTLAIAIEEILRDKKKMEDMSERALKAANPNASAEIAKHILSLVNQSTKKKRNDHKVES* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1531 406 Gene3D Glycogen Phosphorylase B; 41 381 - -
Apr2g1531 406 Gene3D Glycogen Phosphorylase B; 190 375 - -
Apr2g1531 406 CDD GT28_MurG 39 386 - -
Apr2g1531 406 Pfam Glycosyltransferase family 28 N-terminal domain 40 168 IPR004276 GO:0005975|GO:0016758|GO:0030259
Apr2g1531 406 Pfam Glycosyltransferase family 28 C-terminal domain 218 376 IPR007235 GO:0016758
Apr2g1531 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 39 392 - -
Apr2g1531 406 PANTHER UDP-N-ACETYLGLUCOSAMINE--N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE 1 38 390 - -
Apr2g1531 406 Coils Coil 354 374 - -
Apr2g1531 406 Hamap UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 40 391 IPR006009 GO:0050511
Apr2g1531 406 PANTHER GLYCOSYLTRANSFERASE 38 390 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1531 30 396 Glycosyltransferase AT1G73740 50.250 1.46e-128 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1531 K02563 - gmx:100808262 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1531 2 21212429 21216891 Apr2g1531 2 21212429 21216891 ECH