Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1490 ATGGTTTGTTTGGTATCTCGCACAGGAAGGGAGTTGCAGAGATACAACAACATGGGTGGCCGTCAAGTTGTGGGATGCATACCTTATAGGTATAAAGAAGATGTATATGGAAATATGAGCAACGAAGTGGAAGTACTAGTGGTTAGTTCACAGAAAGGTCAAGGATTGATGTTCCCCAAGGGAGGATGGGAACTTGATGAATCTTTAGAAGAAGCAGCTTGCAGGGAATCCCTTGAAGAAGCAGGAGTCAAAGGAATCGTTGAGTGTGAATTGGGCCAATGGAGTTTCATTAGCAAGAGACATGGCATATACTATGAAGGGCACATGTTCCCTTTGTTTGTCAAGGAGCAACTTGATATGTGGCCGGAGAAAAATCTACGTAGAAGAATATGGATGACTGTCGCTCAAGCTAGAGAAGTTTGTCAACATTGGTGGATGAAGGAAGCATTGGATATATTGGTTCAACGACTCATGTCTTCACAACAAAATAAAGATATAGCATTGACCAGTTCTTTAAGTTTTTAA 525 0.4133 MVCLVSRTGRELQRYNNMGGRQVVGCIPYRYKEDVYGNMSNEVEVLVVSSQKGQGLMFPKGGWELDESLEEAACRESLEEAGVKGIVECELGQWSFISKRHGIYYEGHMFPLFVKEQLDMWPEKNLRRRIWMTVAQAREVCQHWWMKEALDILVQRLMSSQQNKDIALTSSLSF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1490 174 Pfam NUDIX domain 44 140 IPR000086 -
Apr2g1490 174 CDD Nudix_Hydrolase_9 22 147 - -
Apr2g1490 174 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 166 - -
Apr2g1490 174 SUPERFAMILY Nudix 13 156 IPR015797 -
Apr2g1490 174 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Apr2g1490 174 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Apr2g1490 174 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 166 - -
Apr2g1490 174 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1490 Apr-Chr2 20919676 20920997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1490 K07766 - gmx:100800108 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1490 2 20919676 20920997 Apr2g1490 2 20919676 20920997 ECH