Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1486 ATGGGTTCCGAAGGATCCAGTGTTGTTGTTCCTAGAAATTTTAGATTATTGGAAGAGCTGGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGATATATACATGCAGTCATGGACTGGGACTATTATTGGCCCCCCTGGTACTGTTCATGAAGGGCGTATCTATCAGCTGAAATTATTTTGTGGCAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACTAGGATTAACATGACTTGCGTCAACCAAGAAACTGGAGTTGAGCCACATTTGTTTCCTATGCTTGCTAATTGGCAAAGAGAGTGCACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGATGTCTCCACAAAATCGGAAGCTTGCTCAGCCTCCTGAAGGCAATGACGATGGCAGGATTGACCAAAAGGGTCTGGTGCTGAGATGCTCCATCGTTTAA 477 0.4298 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVEPHLFPMLANWQRECTMEDILMQLKKEMMSPQNRKLAQPPEGNDDGRIDQKGLVLRCSIV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1486 158 MobiDBLite consensus disorder prediction 127 146 - -
Apr2g1486 158 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 158 IPR000608 -
Apr2g1486 158 Pfam Ubiquitin-conjugating enzyme 41 134 IPR000608 -
Apr2g1486 158 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 143 - -
Apr2g1486 158 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 143 - -
Apr2g1486 158 SMART ubc_7 14 157 - -
Apr2g1486 158 Gene3D Ubiquitin Conjugating Enzyme 2 143 IPR016135 -
Apr2g1486 158 SUPERFAMILY UBC-like 9 140 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1486 Apr-Chr2 20891572 20896137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1486 K10704 - gmx:100820440 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1486 2 20891572 20896137 Apr2g1486 2 20891572 20896137 ECH