Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1480 ATGGAAGAGTACTCCAAGGCTTCCTCTCTTAGCTTTACAGTTAAGCAAGCACAACCTGAATCAGACCCTCCACACGAGGCTATGTTCCTCGTCTTAGCATATCTTCCAGTGTACGAGGTTTTAGTCATGTCTCAAGTTTGCACATCACTAAGGGATGCAGTGAACAATGATATATTACCATGGTTGAATGTTATTGTTGAAAGGCCTCTCAGTTCGCTGCTCAACAACCAGATTCTAATCAAAATCACCTCCAAAGCCATTGGTAGGCTCAAAACACTAGCTCTCATGAACTGCATGCACATTACCGACGAGGGGCTCCAAAGGGTCGTAGAACAAAACCCTCTCATAAACAAGCTCCATATACCAGCATGCACTGGCATAACCCCTGAAGGAGTTCTAAAAGCTGTGAAAACACTATGCCAAAGAAGCAATTGCTTAAACACCTTAAGTATAAACGGCATCTACAACATACAGAAGGAGCATCTTGACATCCTTACCCTGAACCTTAAAAAGAACCCGCCATTAGAGGAGCGGCAAAAGCAGCAGCCTATTTACTATCATGAACGTGGTAGTGTTTCGGTGTTCAAGCGCGAAGAAAGCCGGCGATTTATTGATTTGGAGGTTTGTCCCATGTGCTTTGAGGTGAGGATGGTTTATGATTGCCCAAAAGGACACTGCAAGAGGAGGGAATGGTCCCTAGCTCCATGCAGGGGATGCAACTTTTGTATTCCAAGGTGTGAGAACTGTGGTGGATGCGTTGGATCTGAAGAAGTGGAAGAAGGAGCTTGTGAAGATGTACTGTGTCTTGAGTGTTGGTTACAGCTTCCCAAGTGCAGTTTTTGTAACAAACCATACTGTAAGCAACACACAAACTGGTGGTGCACTTCTTCAGACTCTTCATTGATCTGTAAAGTTTGCGATGAAAATTCTCATGGATATACATATACTGATGTTCTATAA 960 0.4365 MEEYSKASSLSFTVKQAQPESDPPHEAMFLVLAYLPVYEVLVMSQVCTSLRDAVNNDILPWLNVIVERPLSSLLNNQILIKITSKAIGRLKTLALMNCMHITDEGLQRVVEQNPLINKLHIPACTGITPEGVLKAVKTLCQRSNCLNTLSINGIYNIQKEHLDILTLNLKKNPPLEERQKQQPIYYHERGSVSVFKREESRRFIDLEVCPMCFEVRMVYDCPKGHCKRREWSLAPCRGCNFCIPRCENCGGCVGSEEVEEGACEDVLCLECWLQLPKCSFCNKPYCKQHTNWWCTSSDSSLICKVCDENSHGYTYTDVL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1480 319 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 14 312 - -
Apr2g1480 319 SUPERFAMILY F-box domain 24 59 IPR036047 GO:0005515
Apr2g1480 319 SUPERFAMILY RNI-like 78 176 - -
Apr2g1480 319 Pfam F-box domain 24 59 IPR001810 GO:0005515
Apr2g1480 319 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 236 247 IPR017900 -
Apr2g1480 319 Gene3D Ribonuclease Inhibitor 21 172 IPR032675 -
Apr2g1480 319 PANTHER F-BOX PROTEIN SKIP28 14 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1480 Apr-Chr2 20829113 20830933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1480 - - vra:106769044 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1480 2 20829113 20830933 Apr2g1480 2 20829113 20830933 ECH