Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1476 ATGAGCGAGAAGGTTGGTGTTGGATCATGGTCCACTGGGTTTTGCGACTGCTTCTCTGACTGTGGAGCATGTTGCCTCACGCTCTGGTGTCCCTGTGTTAGTTTCGGAAGAATAGCCGAAATTGTGGACAGAGGATCAACTTCTTGTTGTCTACACGGAACACTTTTCTACCTGCTTGCTGGTTTTACTCATTTTGGGGGCATATACGCATGGGTGTATCGTACAAAGCTGAGAAAGCTATACAATATCCATGGAAACGAATGTAGTGATTGCTTGGTGAGTTGCTTCTGCCCCCATTTATCCATTTGCCAAGAGTATCGTGAGCTCAAAGTTCGTGGATTCGACATGGCTGCTGGTTGGCAAGGGAACGTGGAAATGCGTACACGTGGCGTCACGTCAGCTCCAGCAGTGGAAGGTGGCATGAGCCGTTAG 432 0.4884 MSEKVGVGSWSTGFCDCFSDCGACCLTLWCPCVSFGRIAEIVDRGSTSCCLHGTLFYLLAGFTHFGGIYAWVYRTKLRKLYNIHGNECSDCLVSCFCPHLSICQEYRELKVRGFDMAAGWQGNVEMRTRGVTSAPAVEGGMSR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1476 143 Pfam PLAC8 family 10 108 IPR006461 -
Apr2g1476 143 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 9 110 IPR006461 -
Apr2g1476 143 PANTHER DUF614 FAMILY PROTEIN-RELATED 8 142 IPR006461 -
Apr2g1476 143 PANTHER PLAC8 MOTIF-CONTAINING PROTEIN-RELATED 8 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1476 Apr-Chr2 20808623 20809380 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1476 - - lang:109330762 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1476 2 20808623 20809380 Apr2g1476 2 20808623 20809380 ECH