Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1468 ATGGCAGCAAAACGTTTTTCGGATGATTCTGATCAAGACAATGATAAGCCAGGCGATAAACGGATGAGAAGTGCAAGACCTTCTTTTGCTTCTGTAATAGGGGAAGTTGTTATGGTGAAAAATTTGCAAAACCTTTTCTCGGGTTTGGAACCCTTGCTTAGAAGAGTGGTGAATGAAGAGGTGGATCGAGTGATGAGACATCGTTGTCCACGATCAATAACTAGGTCCCCTTCATTGAGAATCCAAGCATTGGAGCAACCATCAAGCTATCAACTCATGTTTAACAAAAAGCTTTCGCTCCCTATATTCACGGGTAGTAGAATATTAGATATAGATGGGAACCCCATCCATGTGGTTCTTGTTGACAAAAGTAATGGTCAAATGGTTACCACGATTTTTCAACACCCCATCAAGCTAGAAATTGTGGTTCTAGATGGAGATTTTCCTCCTGCTGGTGATAACAACGAGTCATGGACGAGTGATGCATTCAACAACCACATAGTGAAGGAGAGAACAGGGAAAAGACCATTGCTTACCGGAGAATTGAATCTGACCATGAGGGATGGAATTGCACCAATTGGAGACATTGAGTTCACTGATAATTCTAGCTGGATTCGTAGCAGAAAGTTTAGAGTTGCTGTGAGAGTGGCTCCAGGGAGTAATCAAACTGTTCGAATTCGTGAAGGCATGACTGAACCATTTATCGTGAAGGATCACCGGGGTGAATTGTACAAGAAACACCACCCACCAATGCTACACGACGAAGTGTGGCGCCTAGAGAAGATAGGGAAAGACGGAGCTTTCCACAAAAAATTGTACAAAGAAGGGATTAACACAGTGCAAGATTTTCTCAAGTTATCCGTTGTTGATCCCCATAAGCTCAGAAAGATTTTAGGCGTTGGGATGTCAGAGAAAATGTGGGAAGTGACAATTAAGCATGCAAAGACTTGCAACATGGGCAACAAACTTTACGTCTATCGTGGGGCTAATTTTACAATCTTTCTCAATGCCATATGCCAATTGGTTAGAGCTGATGTCAACGGCCAAAACTTTCCCAGCAAAGAACTGAGCAACATGAGCAGGAGCTATATGGAAAGATTGTTGAGAGAAGCATACGATAGTTGGAAACACTTGGAAGAAATTGATGGGGCTTTGAATGATAATGTTGCTTTGTTAACCCAAGGTGAAACAGTGGAGCAATTTCCAAACAATCATCAAGCATCATTAATGGCATATGATCAGAACGATTATTTTGGTGATAAATCTGCAGAGGGTGGCAACTACGTTCCTAGCCATAACGCACAAATGGGGTGCAACGAGTGGGCACTGAGTGCACAATTTGCTTCACCATCGTTCGTGAATGGCATGCCTTATAGCTTCTCACTCTCAGAGTCACAATCGGACAGTGACATAACACCCTCAGTTGATGGTGCTGCAAGGTGGCATTAG 1449 0.4279 MAAKRFSDDSDQDNDKPGDKRMRSARPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVDRVMRHRCPRSITRSPSLRIQALEQPSSYQLMFNKKLSLPIFTGSRILDIDGNPIHVVLVDKSNGQMVTTIFQHPIKLEIVVLDGDFPPAGDNNESWTSDAFNNHIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAPGSNQTVRIREGMTEPFIVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLYKEGINTVQDFLKLSVVDPHKLRKILGVGMSEKMWEVTIKHAKTCNMGNKLYVYRGANFTIFLNAICQLVRADVNGQNFPSKELSNMSRSYMERLLREAYDSWKHLEEIDGALNDNVALLTQGETVEQFPNNHQASLMAYDQNDYFGDKSAEGGNYVPSHNAQMGCNEWALSAQFASPSFVNGMPYSFSLSESQSDSDITPSVDGAARWH* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1468 482 Pfam Calmodulin binding protein C-terminal domain 322 381 IPR046829 -
Apr2g1468 482 Pfam Calmodulin binding protein-like N-terminal domain 90 239 IPR046831 -
Apr2g1468 482 MobiDBLite consensus disorder prediction 1 25 - -
Apr2g1468 482 PANTHER PROTEIN, PUTATIVE-RELATED 1 476 - -
Apr2g1468 482 MobiDBLite consensus disorder prediction 462 482 - -
Apr2g1468 482 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Apr2g1468 482 MobiDBLite consensus disorder prediction 1 23 - -
Apr2g1468 482 PANTHER OS02G0177800 PROTEIN 1 476 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1468 Apr-Chr2 20717172 20721736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1468 3 383 Calmodulin-binding Proteins AT5G57580 49.223 1.23e-120 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1468 - - gmx:100802257 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1468 2 20717172 20721736 Apr2g1468 2 20717172 20721736 ECH
Apr2g1468 2 20717172 20721736 Apr6g1048 6 15165733 15169881 PCT