Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1462 ATGAGGTCTTCTTCGGAGACCATCAACATCGCTGCGATTACACAGAAACTTGATGTTGATAATCGAATTGCTCTCCGTTTCTACTTCAGGATCGCCGATAATATCCTCAAACAGGCTGATATCTTTCGTGCAGAGAAAAATTTTGTTGATCTATATATCATGCTCCTAAGATTTTCTAGTTTGGTCTCTGAGACAATACCAGGTCACCGAGATTATAGAACTTCTCCACGAAACAAGAAAGAAGCTTTGAGAAAGAAATTGTTAAATTCTGTGAATGAGCTGGAGAAGTTGAAACCACTGGTACAACAGAAGATCAATGAGTTTAACAGCAGGCGAGCATTTCAACGCAATGGGTGGGAAAAATGTCATTCAAATAATTTGATGGACTTTTCTCCAGTGAAAAAGCAAACTTTTGTTAGTTATAATCAAATAAAGGCTGTTAGACCAACCACTGGAGGGTTTCTCTACCAAGGATCAAGGGGCCCGCAGTTTTCTTGTGGAAGGCCTGTGGAAGAGAATATGAGGAGACTATCTCTAACTCTCCCACGCCCAAAGGAGGAAACTCTCTCCAGACATTCTATTTTAGGTCCCAATGGGCTCAAAGGGCAGTGGCAACCGCCTTCAAGTGTTAAAGGGGTCAGCTATCCAACCATCGCAGATTTGTCTCCAGTTGAAATTCCAAGTGTTCAACAGCCCTTGGAAGATGGATCTCTGAATAAAAAAGATAATAGCATTTCAGAACATGGATCAGATTTAGAATCAATTCTTACCCAGAGTGAGGAGGACTGCCAGGCCCAGCATGCTGATGAAGCTCCTTCTCTTATCTCTTTTGAAACAACAGAAATTCCTTCTCAAATAGAGGTTATCAGACAGCCTTCACCTCCACCTGTACTTGCTGAAGTACAAGATTTGGTTCCTGCAGTGTCACCTCATGTTAATGAGGATGGATGTAAGACAGAGATACCAGCATCGGATAGTTTTATTCGTTCTGAGTCTCCTCTGCAACTACACATTTCAACTGCTATGATGGAGAGTTTTATGAAGCTTGCCAAGTCAAATACTGACAAAAATTTGGAGACTTGTGGGATCCTTGCAGGTTTACTTAAAAACAGAAAGTTTTATATTACAGCTCTAATAATCCCAAAGCAGGAGTCAACATCAAGTTCGTGTCAAGCTACAAATGAAGAGGAAATATTTGAAGTACAGGATAAGCAATCTCTTTTCCCTCTTGGGTGGATCCATACACATCCTACACAATCTTGTTTCATGTCATCAATTGATCTACACACCCATTACTCATATCAGATTATGCTGCCAGAAGCTGTTGCAATAGTTATGGCACCAACAGACAGTTCAAGAACCCATGGCATTTTTCGGTTGACTACTCCTGGTGGCATGTCGGTCATTAGACAATGCCCGCAACGTGGCTTTCATCCACACAATCAGCCTCCGGATGGTGGTCCCATTTACGATACATGTACAGATGTTTACATGAACCCAGATTTAAAATTTGACGTCATTGATCTTCGATAA 1533 0.4129 MRSSSETINIAAITQKLDVDNRIALRFYFRIADNILKQADIFRAEKNFVDLYIMLLRFSSLVSETIPGHRDYRTSPRNKKEALRKKLLNSVNELEKLKPLVQQKINEFNSRRAFQRNGWEKCHSNNLMDFSPVKKQTFVSYNQIKAVRPTTGGFLYQGSRGPQFSCGRPVEENMRRLSLTLPRPKEETLSRHSILGPNGLKGQWQPPSSVKGVSYPTIADLSPVEIPSVQQPLEDGSLNKKDNSISEHGSDLESILTQSEEDCQAQHADEAPSLISFETTEIPSQIEVIRQPSPPPVLAEVQDLVPAVSPHVNEDGCKTEIPASDSFIRSESPLQLHISTAMMESFMKLAKSNTDKNLETCGILAGLLKNRKFYITALIIPKQESTSSSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPTDSSRTHGIFRLTTPGGMSVIRQCPQRGFHPHNQPPDGGPIYDTCTDVYMNPDLKFDVIDLR* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1462 510 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 333 439 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr2g1462 510 Coils Coil 77 97 - -
Apr2g1462 510 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 2 510 - -
Apr2g1462 510 ProSiteProfiles MPN domain profile. 336 466 IPR037518 -
Apr2g1462 510 MobiDBLite consensus disorder prediction 227 249 - -
Apr2g1462 510 PANTHER AMSH-LIKE PROTEASE 2 510 - -
Apr2g1462 510 Pfam USP8 dimerisation domain 9 99 IPR015063 -
Apr2g1462 510 SMART pad1_6 335 463 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr2g1462 510 Gene3D - 1 124 - -
Apr2g1462 510 MobiDBLite consensus disorder prediction 183 211 - -
Apr2g1462 510 SUPERFAMILY JAB1/MPN domain 335 466 - -
Apr2g1462 510 SUPERFAMILY USP8 N-terminal domain-like 22 116 - -
Apr2g1462 510 Gene3D Cytidine Deaminase, domain 2 319 510 - -
Apr2g1462 510 CDD MPN_AMSH_like 335 510 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1462 Apr-Chr2 20667141 20673905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1462 K11866 - gmx:100800636 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1462 2 20667141 20673905 Apr2g1462 2 20667141 20673905 ECH