Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1444 ATGTCTCGAATCTTCGAATACTTCGTGGTCTGTGGGATCGGACCGGAGATTCGAACCATGGATGGAAGTAAAGGCTACCATGGTCCTGGTTGCATGTATCTTCCCTCTCTTCTGGATCAGTATCCTCCTCCCAATCACTCGCTTTACCCTCCTCCGCCTCCTCAACTTCCAACATGTGTTTTGCCGGCCGGCGTTGAGTTCTATTCGTCGGGATTTGATTCCAATGATCCGTCCTCGTTTCCGCGGAGCTATCCGATTGTTTTAACCGAGGGTGATGGATCAAAAATCTATGTTACCTGCATTTCTTTCCGGGATCCAGTTTGTGAGGATATTGCAGACGCCTATCGGATACAGGCAAATTCATATGCTGACAAATGCATCTGTCTAGTTTCACGCTTGCCAAGTTTCCGTGTACTAAGAAGTGCCCTAGAGGAAATATATGCTCTGTGTTTTTCCCCAAATGGAAGTAGCAAGCCACTATGGGATGTTATATCACATATGGTGTCCAGTGTTCCTTTGCCAACTCCTGGAAAGGAGAGAGTTCTGTTTGCTATTGAGAGTTGTTTGCTTTCTGTAGAAGCTCCACCAAGCGATGGGCTTCCTCATGCTGATATATCTTTTCAGCCACTGGTGCAGTGCTTGGACGTTTACAACTTAATGACACTTTTTACTGCAGTGTTGCTAGAGAGGAGGATTTTACTTCGAGCTAACAAGTATTCACTTCTAACTCTTGCATCAGAGGCCATTTGTCACTTAATCTATCCATTCCGCTGGCAGCATGTATACATTCCGTTGCTGTTTTTCAGTGGAGTAGATTATATTGATGCTCCTACACCATATATGATGGGGCTCTATTCGGGTGTTGATACTTCTGCTCTGGCAATGGATGGGGTAGTTGTTGTGGACCTTGAGTATAATCGTATCACTACCTCAGAGGAAATTCCACCAATTCCTGAGCCAGAATATAGCTTTTTACGTGGTGAGATAATGAAGTTATTATATCCGAATGTAATTGGAATTGATGAGATGAAGGCTGGAATGTGCAGTGTTATATCTGAGAATTATCCTAAACCTAGGGCTAAGCAATGGGGAGAGGAACATGACCTTCAGCTAAGGATGATATTCCTAAAGTTCTTTGCAACAGTTTTAAGTGGCTACCGCAATTTCCTAGAAAATAGTGCTACTCAAGTCTTCAATACTCAAGCTTTTTTGAAGAAGCGGTCTCGATCTACTAATCAACCACCAGAGCCCATGATAGCTCAGTTCCTTGACTCTCATGGTTTCTTGGATTATTTGGAAAGAGGAGTAGGTTCTGATGAAAACAACAATAATCTGCTTGATAAACTACAAGATGCAATGGGAAGGGGTCAAAACCCTATGTCAATTCTTCCTTCATCCTCAGTAGAGCCTGAGATTTTAACAGTGTCAGATTCTGATGTTGGAATATCAGGATCTGGTGCCAAATACACTTATGATAGATTCCCTGCAAACATCAGAACAGAAGAGCAAGAAGAAAAGAGGAAACAGATTCTTGCAGCAGTTAGTAATGCCTTTGAATACTCAGGAAGACATACTCCAAGTAAGGATCCCTTAGCAGATAGTCTTAGTCCACTTGAGAGAGCTGCTGAAAGGGAGCGCATGGTGCTGGATATCAAGGTTAAGCTGCAGGGTTTATGGTTGCGGCTTCTTAAACTGGGAGCAACAGATGATCCTCTCTCATCCTTTGAATACGGAACAATACTTGCTTTGATTGAATCTGATGCAGAGGGGATTGGTGGTAGTGGATTTGTTGAATGTATAAGAGAGCATATACATTCAGGTTGGGACTGTCAGCTCACTGAAGAACAGTTTATTGCAGTGAAAGAATTGCTCAAAACAGCTATCAATCGTGCAACATCACGGAATGACTACTTGACCATTAGAGATGCTCTTGAAGTTTCTTCTGATATGTATAAGAAGGACAACAACAATGTGCCCGACTACGTCCAACGTCATCTTATCTCTCTATCTATTTGGGAGGAATTACGATTTTGGGAAGGATATTTTGACTATTTAATGGAGCAATCTTCAAACAAGTCAGCCAACTATGCATCTTTGGTGACAGCACAGCTTGTTGTGTTGGCATCACACATGGCTGGGCTGGGACTTCCTGATAATGATGCTTGGTACATGATTGAAACTATTGCAGAAAGGAACAGCATTGGATCCAAGCAATTTATAAAAATCAGAGGGTTTTTGTCTCATATTGAGCAATTACGTAATGGTTACTGGGGAATCACCTCAATGAAGGTACAGTCTATGTTATCACATGCATTGCCATCCCCACATTCTAAAGATGCCAAAGATGAGAACCAGCAACCCACTGAGGCAACTGGTGTTGGTAGAAGCTGGGTGCAAAGCATGTTCAGCCGAAATACAACATCTAGATCCAGCTCATTTAGTCGTGTCCGTAGATGGACATCTGATGGAGGCAATTCAGCTACAAATGAGAATGGAACTCCTCGCAAACAAGATCCTTCAACTGGTGGGCAAAAGAAGCTTCAAACCAATGTTCGCATACTTAGGGGTCATAATGGTGCCATTACTGCTCTCCATTGTGTTACAAAGAGAGAGGTGTGGGACTTGGTGGGTGACCGTGAAGATGCTGGGTTTTTTATTAGTGGAAGCACAGATTGCTCTGTTAAGATCTGGGATCCTAGTCTTCGTGGTTCTGAACTCAGGGCAACTTTAAAAGGGCATATTAGAACTGTCCGTGCCATAAGTTCAGATAGGGGGAAGGTGGTGTCAGGATCTGACGATCAATCTGTTTTGGTGTGGGATAAACAAACAACTGAACTTCTAGAAGAGCTTAAAGGCCATGATGGACCGGTCAGCTGTGTGCGCATGCTCTCAGGTGAACGCGTGCTAACTGCATCCCATGATGGCACTGTGAAGATGTGGGACGTAAGAACTGATAGATGTGTTGCAACTGTTGGTCGTTGCTCTAGTGCTGTTTTATGCATGGAATATGATGACAATGTGGGACTCTTGACTGCCGCTGGAAGAGATGTGGTTGCTAACATATGGGACATCCGTTCTGGTAGGCAGATGCATAAACTTTCAGGGCATACACAATGGATACGGTCCATAAGAATGGTTGGTGACACTGTGATTACTGGTAGTGATGATTGGACAGCTAGAATATGGTCTGTTTCCCGAGGAACATGTGATGCTGTCCTAGCATGCCATGCAGGGCCAATATTATGCGTTGAATATTCTTCTTTGGACAGAGGAATAATTACAGGATCAACTGATGGCCTGCTACGTTTTTGGGAAAATGATGATGGAGGCATAAGGTGTGCAAAGAATGTAACAATTCACAATGCTGCCATATTATCTATCAATGCTGGGGAGCACTGGTTAGGCATTGGAGCAGCTGATAATTCTCTGTCTCTCTTTCATCGGCCCCAAGAAAGACTTGGTGGATTTTCTGGCACTGGATCCAAGATGGCTGGTTGGCAGCTTTACAGAACACCACAGAAAACAGTTGCTATGGTAAGATGTGTTGCGTCAGACTTGGAAAGGAAAAGGATATGCAGCGGTGGTCGTAATGGGCTTCTAAGGCTGTGGGATGCAACCATCAATATTTAA 3630 0.4355 MSRIFEYFVVCGIGPEIRTMDGSKGYHGPGCMYLPSLLDQYPPPNHSLYPPPPPQLPTCVLPAGVEFYSSGFDSNDPSSFPRSYPIVLTEGDGSKIYVTCISFRDPVCEDIADAYRIQANSYADKCICLVSRLPSFRVLRSALEEIYALCFSPNGSSKPLWDVISHMVSSVPLPTPGKERVLFAIESCLLSVEAPPSDGLPHADISFQPLVQCLDVYNLMTLFTAVLLERRILLRANKYSLLTLASEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLYSGVDTSALAMDGVVVVDLEYNRITTSEEIPPIPEPEYSFLRGEIMKLLYPNVIGIDEMKAGMCSVISENYPKPRAKQWGEEHDLQLRMIFLKFFATVLSGYRNFLENSATQVFNTQAFLKKRSRSTNQPPEPMIAQFLDSHGFLDYLERGVGSDENNNNLLDKLQDAMGRGQNPMSILPSSSVEPEILTVSDSDVGISGSGAKYTYDRFPANIRTEEQEEKRKQILAAVSNAFEYSGRHTPSKDPLADSLSPLERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDAEGIGGSGFVECIREHIHSGWDCQLTEEQFIAVKELLKTAINRATSRNDYLTIRDALEVSSDMYKKDNNNVPDYVQRHLISLSIWEELRFWEGYFDYLMEQSSNKSANYASLVTAQLVVLASHMAGLGLPDNDAWYMIETIAERNSIGSKQFIKIRGFLSHIEQLRNGYWGITSMKVQSMLSHALPSPHSKDAKDENQQPTEATGVGRSWVQSMFSRNTTSRSSSFSRVRRWTSDGGNSATNENGTPRKQDPSTGGQKKLQTNVRILRGHNGAITALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSELRATLKGHIRTVRAISSDRGKVVSGSDDQSVLVWDKQTTELLEELKGHDGPVSCVRMLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGLLTAAGRDVVANIWDIRSGRQMHKLSGHTQWIRSIRMVGDTVITGSDDWTARIWSVSRGTCDAVLACHAGPILCVEYSSLDRGIITGSTDGLLRFWENDDGGIRCAKNVTIHNAAILSINAGEHWLGIGAADNSLSLFHRPQERLGGFSGTGSKMAGWQLYRTPQKTVAMVRCVASDLERKRICSGGRNGLLRLWDATINI* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats profile. 950 990 IPR001680 GO:0005515
Apr2g1444 1209 PANTHER C-MYC PROMOTER BINDING PROTEIN 3 1209 - -
Apr2g1444 1209 ProSitePatterns Trp-Asp (WD) repeats signature. 968 982 IPR019775 -
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats profile. 995 1032 IPR001680 GO:0005515
Apr2g1444 1209 CDD WD40 850 1146 - -
Apr2g1444 1209 PANTHER DENN DOMAIN-CONTAINING PROTEIN 3 3 1209 - -
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats profile. 1033 1072 IPR001680 GO:0005515
Apr2g1444 1209 MobiDBLite consensus disorder prediction 770 845 - -
Apr2g1444 1209 Gene3D - 202 388 IPR043153 -
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1073 1105 - -
Apr2g1444 1209 SMART DENN_cls 122 306 IPR001194 -
Apr2g1444 1209 SMART uDENN_cls 1 104 IPR005113 -
Apr2g1444 1209 Pfam uDENN domain 35 103 IPR005113 -
Apr2g1444 1209 MobiDBLite consensus disorder prediction 786 845 - -
Apr2g1444 1209 ProSiteProfiles Tripartite DENN domain profile. 18 443 IPR037516 -
Apr2g1444 1209 Gene3D - 1016 1208 IPR015943 GO:0005515
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 950 984 - -
Apr2g1444 1209 SMART dDENN_cls 367 435 IPR005112 -
Apr2g1444 1209 ProSitePatterns Trp-Asp (WD) repeats signature. 1191 1205 IPR019775 -
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats profile. 1073 1105 IPR001680 GO:0005515
Apr2g1444 1209 Gene3D - 1 176 - -
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats profile. 910 949 IPR001680 GO:0005515
Apr2g1444 1209 Gene3D - 808 1015 IPR015943 GO:0005515
Apr2g1444 1209 PRINTS G protein beta WD-40 repeat signature 927 941 IPR020472 -
Apr2g1444 1209 PRINTS G protein beta WD-40 repeat signature 968 982 IPR020472 -
Apr2g1444 1209 PRINTS G protein beta WD-40 repeat signature 1050 1064 IPR020472 -
Apr2g1444 1209 SUPERFAMILY WD40 repeat-like 851 1205 IPR036322 GO:0005515
Apr2g1444 1209 Pfam WD domain, G-beta repeat 849 898 IPR001680 GO:0005515
Apr2g1444 1209 Pfam WD domain, G-beta repeat 946 981 IPR001680 GO:0005515
Apr2g1444 1209 Pfam WD domain, G-beta repeat 908 940 IPR001680 GO:0005515
Apr2g1444 1209 Pfam WD domain, G-beta repeat 1068 1104 IPR001680 GO:0005515
Apr2g1444 1209 Pfam WD domain, G-beta repeat 1028 1063 IPR001680 GO:0005515
Apr2g1444 1209 ProSiteProfiles Trp-Asp (WD) repeats profile. 880 898 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 1026 1063 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 943 981 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 1066 1105 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 984 1023 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 1165 1204 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 847 898 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 903 940 IPR001680 GO:0005515
Apr2g1444 1209 SMART WD40_4 1110 1147 IPR001680 GO:0005515
Apr2g1444 1209 Pfam DENN (AEX-3) domain 123 304 IPR001194 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1444 838 1156 Acyl Lipid Metabolism Gene Families AT3G18860 26.791 1.72e-17 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1444 - - gmx:100818305 2268.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1444 2 20472865 20492711 Apr2g1444 2 20472865 20492711 ECH