Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1442 ATGGCTTTGATTCTCAACTCATCATTAATCATTTTCCTCACCGTGTCACTTCTCTTCTCCCTTCCGCGTGCTAACGCTGCGTCATCTCAGTTCTCCATTTCTGTTCTCAACGTCACAGAAGCACTCCACCAAGCTCACCAAATCCTCTCCTTCAAACCCAAAACATTCCAACCATTTTCTTCTTCTTCTTCTTCATTCTCGCTCCAATTACACCCAAGAGACTCTCTCTTCAAAGCTCATCACAAGGACTACCGTAGCTTAGTCCTCACTCGACTCGCCCGTGACTCAGCCCGAGTCACTCATATCCGCTCCAAGCTCAGCCATGTCAGCAAAACGGAGCTCCGACCGCAAGGCCAATCGCCGCCGGTGACATCCGGCGTTTTATATGGAAGCGGCGAGTACTTCACAAGAATCGGAGTGGGACAACCTTCCCAAACCTTCTACGTGGGTCTCGACACGGGCAACGACCTCAGCTGGGTTCAGTGCAGGCCCTGTCTCGATTGTTACAAACAATTCGACCCAATTTTCGACCCGTCCATGTCATCCTCGTACGTCCCGGTTACTTGCGAATCCGATCAGTGCCACCAACTCAATAACTCGTCTTGCTTTAACAACCAATGCCAATACGACATCGTGTATGGAGACGGTTCATTCACAAAAGGGAGTCTCGTCACCGAAACGATGTCGTTGGGCAACATCGGTACAGTAAACCAGATCGCAATGGGTTGTGGCCACGACAACCATGGTTCGTTCGTAGCAGCCGCGGGAATACTCGGTCTCGGAGGTGGGCCCCTCTCATTTACTTCCCAAATCAAAGCGACGTCGTTTTCTTATTGCTTGGTAGATCTTGACACGGACAAAACGTCTACGCTTGAGTTCAACTCGCCCCTACCCCGCCACTCGGTGACGACTCGGTTGCTGAAGAACCCTAACTCAAACACTTTATACTACGTGGAAATCACGGGAATGAGCGTGGGAGGAATACCTCTTCCCATTCCAGAATCGGTGTTTGAGATGGATGCATCGGGGCGCGGTGGAATCATCGTGGACTCTGGCACCGTCATAACTCGGTTGCTGAATCCGGCGTATGAGGCGTTGCGCGACGCGTTCGTGGCGCTGACTAAGCACTTACCACGCGCGAAGGGGTTCACGCCGTTGGAAACGTGCTACGATTTGCCGTCGCCACCGCGGGTGATCCCGTCGGTGTCGTTTGAGATGCGTGGAGGGTCGTGGAGGTTGGCGGAGGAGGCGTGTTTGATTCGGGTGGACACGAATGGGACACTCTGCTTCGCTTTTGCGCCGTCAAATTATCCGTTATCTATCATTGGGAATTTTCAGCAACAGGGCTCGCGCGTGAGCTTTGATCTTGCAAATTCCGTCGTTGGTTTTTCTCACCCTTAA 1401 0.5218 MALILNSSLIIFLTVSLLFSLPRANAASSQFSISVLNVTEALHQAHQILSFKPKTFQPFSSSSSSFSLQLHPRDSLFKAHHKDYRSLVLTRLARDSARVTHIRSKLSHVSKTELRPQGQSPPVTSGVLYGSGEYFTRIGVGQPSQTFYVGLDTGNDLSWVQCRPCLDCYKQFDPIFDPSMSSSYVPVTCESDQCHQLNNSSCFNNQCQYDIVYGDGSFTKGSLVTETMSLGNIGTVNQIAMGCGHDNHGSFVAAAGILGLGGGPLSFTSQIKATSFSYCLVDLDTDKTSTLEFNSPLPRHSVTTRLLKNPNSNTLYYVEITGMSVGGIPLPIPESVFEMDASGRGGIIVDSGTVITRLLNPAYEALRDAFVALTKHLPRAKGFTPLETCYDLPSPPRVIPSVSFEMRGGSWRLAEEACLIRVDTNGTLCFAFAPSNYPLSIIGNFQQQGSRVSFDLANSVVGFSHP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1442 466 Pfam Xylanase inhibitor N-terminal 134 293 IPR032861 -
Apr2g1442 466 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 33 465 - -
Apr2g1442 466 Gene3D Acid Proteases 295 466 IPR021109 -
Apr2g1442 466 Gene3D Acid Proteases 108 293 IPR021109 -
Apr2g1442 466 SUPERFAMILY Acid proteases 126 464 IPR021109 -
Apr2g1442 466 Pfam Xylanase inhibitor C-terminal 316 464 IPR032799 -
Apr2g1442 466 PANTHER ASPARTYL PROTEASES 33 465 IPR001461 GO:0004190|GO:0006508
Apr2g1442 466 ProSiteProfiles Peptidase family A1 domain profile. 134 464 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1442 Apr-Chr2 20458223 20460931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1442 125 463 Miscellaneous Gene Families AT1G77480 25.532 6.22e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1442 K22683 - gmx:100784849 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1442 2 20458223 20460931 Apr2g1442 2 20458223 20460931 ECH