Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1440 ATGGCCTCCAACACTTGTTCGTCCTGGCTCCTAGTCTCATCCTCCAACGCCAAACGCCGTGCCTTCTCCTTGGTCCCAACCTGCTTCAAACTCACTGCTTCACAGACTCAATGGCATTCAAATTCTTATACTCGCAGAAACGGCTTCCCCGTAATCAAACGCCATTGGGTTGAAGCAACTGATGAATCGTTTGCATCTCCAGAAAGATTCACCGTGGCTTCATACAACATACTTGGGGATAGAAACGCTTCTCAACACACAGATTTATACGTAAACGTCCCTTCACGTTACGTCAACTGGGATCGCCGCAAAAGGGTTATCTGTGATGAACTCTTTGGATGGAACCCTGATATTATCTGTTTACAAGAGGTTGACAAGTATCTTGAACTCTCTGACATTTTGGTTAAAGCTGGATACGCTGGATTTTATAAGAGACGCACTGGGGATTCAGTTGACGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTGCGGTTATTAGAAGGAGAGAGCATTCAATTTAAGGACATTGGCCTTCGTGATAATGTTGCTCAACTTTCAGTTTTTGAGATGTGTGAATCTGAGTCAAGAAGACTGTTGGTTGGTAACATCCACGTACTTTACAACCTAAACAAGGGAGAAGTTAAACTAGGTCAAATTCGTTTTCTCACATCGAGAGCACAGACCCTCTCAGAGAAATGGGGTAATACCCCTGTTGTGCTAGCTGGTGATTTTAATAGAACACCTCAGAGTGGAATATACAAGTTCTTGTCATCATCTGAGCTTAATATCATGCTGTATGACAGAAAGGAATTATCTGGACAGAAACGCTGTCGCCCTGCTCAAGTTTTAGGCGAGAATAAAGAAACTGTTGGTCCATTAGTATTATTGGATGGATTGTTTAAGTGCTGGACAGATGAAGAGGTAAAAATTGCAACGGGTGATTCTGAGCGTCATTTGGCTGTGCATCCATTGAAGCTGAATAGTTCGTACGCCACTGTTAATGGTTCAACTAATACACGGGGATTCAGTGGTGAACCTTTGGCAACTTCCTATCACTCAAAGTTTCTTGGTACTGTAGATTACTTATGGTACTCTGACGGGATTGTACCTACAAGAGTTCTTGATACCGTTCCAATAAGTGATCTCGTGAGGGCAGGTGGCCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCCTTGGTTTCTGAATTTTCCTTCTCGGATACCAACAATAAACCTACAGACATGGTTGCAGCAGCATCATCGCCTCAAGTAAATATTGAAGAGTTTGACAATCTGCAGCCATAA 1308 0.432 MASNTCSSWLLVSSSNAKRRAFSLVPTCFKLTASQTQWHSNSYTRRNGFPVIKRHWVEATDESFASPERFTVASYNILGDRNASQHTDLYVNVPSRYVNWDRRKRVICDELFGWNPDIICLQEVDKYLELSDILVKAGYAGFYKRRTGDSVDGCAMFWKADKLRLLEGESIQFKDIGLRDNVAQLSVFEMCESESRRLLVGNIHVLYNLNKGEVKLGQIRFLTSRAQTLSEKWGNTPVVLAGDFNRTPQSGIYKFLSSSELNIMLYDRKELSGQKRCRPAQVLGENKETVGPLVLLDGLFKCWTDEEVKIATGDSERHLAVHPLKLNSSYATVNGSTNTRGFSGEPLATSYHSKFLGTVDYLWYSDGIVPTRVLDTVPISDLVRAGGLPCKKVGSDHLALVSEFSFSDTNNKPTDMVAAASSPQVNIEEFDNLQP* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1440 435 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 32 408 - -
Apr2g1440 435 Pfam Endonuclease/Exonuclease/phosphatase family 73 397 IPR005135 GO:0003824
Apr2g1440 435 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 32 408 - -
Apr2g1440 435 Gene3D Endonuclease/exonuclease/phosphatase 45 422 IPR036691 -
Apr2g1440 435 SUPERFAMILY DNase I-like 68 405 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1440 Apr-Chr2 20439281 20444437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1440 100 258 EF-hand Containing Proteins AT5G54130 28.324 2.37e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1440 - - gmx:100779393 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1440 2 20439281 20444437 Apr2g1440 2 20439281 20444437 ECH