Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1300 ATGGCTGCAGCAGATATTGCTAGAACAGTAGTTGGCATAATAGGAAACATCATCTCGGGCTTCTTGTTCTTGTCCCCAGTGCCAACTTTTATGGAAATATGGAGGAAAGGATCAGTGGAGCAGTTTTCTCCAGCACCATATCTAGCGACGCTAGTGAACTGCATGGTTTGGACCCTGTACGGTCTACCCATGGTGCACCCACACAGCCTTTTAGTGGTAACCATAAACGGCTCAGGGTGCGTCATTGAGATCATCTACGTTACACTCTTCTTGATCTACTCTAACCGAAGCAAGAGGCTCAAGGTGTTCTTGTGGCTGTTAGTGGAACTCATTTTCATCACAGCCCTCACCCTTGTCACATTAACTCTCGTCCACTCCCTCAAGAAACGATCTGCCATCGTTGGAACCACTTGCATTCTCTTCAACATTATGATGTATGCTTCACCTTTAGCTGTCATGAAACTGGTGATCAAGACCAAGAGCGTTGAGTACATGCCGTTTTTCATCTCTCTGGCCTCCTTTGGGAATGGCGTGGCTTGGACTACTTATGCTCTCATCCGTTTCGACCCATTCATTACCATACCAAATGGGCTTGGAACATTGTTTGCGGTCGCGCAGCTGATTTTGTATGCCACCTATTACAAGTCAACGAAGAGGCAGATAGCGGCAAGGAAAGCCAACGTAGAAGTGGACCTGTCGCAGGTGGTGGCTGGTAGTGACGGCCAAGGATCCAAACCAAATTATTGA 747 0.4739 MAAADIARTVVGIIGNIISGFLFLSPVPTFMEIWRKGSVEQFSPAPYLATLVNCMVWTLYGLPMVHPHSLLVVTINGSGCVIEIIYVTLFLIYSNRSKRLKVFLWLLVELIFITALTLVTLTLVHSLKKRSAIVGTTCILFNIMMYASPLAVMKLVIKTKSVEYMPFFISLASFGNGVAWTTYALIRFDPFITIPNGLGTLFAVAQLILYATYYKSTKRQIAARKANVEVDLSQVVAGSDGQGSKPNY* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1300 248 PANTHER RAG1-ACTIVATING PROTEIN 1 4 239 - -
Apr2g1300 248 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016021
Apr2g1300 248 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Apr2g1300 248 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 239 - -
Apr2g1300 248 Gene3D - 124 218 - -
Apr2g1300 248 Gene3D - 6 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1300 Apr-Chr2 19183547 19185870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1300 2 247 Miscellaneous Gene Families AT4G10850 54.941 9.50e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1300 K15382 - gmx:100802303 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1300 2 19183547 19185870 Apr2g1300 2 19183547 19185870 ECH