Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1296 ATGGCATCGTCTTCACTCACTTCAATTCCTCTCTCCTCTTCTTCCCTCAACATTCCACATTGTTGCTCCAAACCTTCGTTCACTTTTCTGTCTTCTCCTAGTGGAGCATTCGCTGGCAGCCTCAAACCTCTGCTTGCCGAATCAAAATCCCACTTTTACCAAAAGAGAAACGATTCTGGGTTTTCCGTCAGAGCCCAAACGCTAGACTTCTCTGATTCATTTTTCGAAGGCGGATTCGGGTCGGAAGAGGACCCCACCTCTCCCCTACCCGGCTTCACCGCTGTGGAGGAAAAGGAAGAACCCCAATGCCCACCCGGACTCCGACAGTACGAAACAATGATGGTTTTGAGGCCAGACATGTCCGAGGATGAGCGACTTACACTGACCCAGAAGTACGAGGAGCTACTTGTTGCTGGAGGTGGTATGTACGTAGAGGTTTTTAACAGAGGAGTTATTCCACTAGCATATAGCATCAAGAAGAAAAACAAAGCAGGAGAGAGCAACACATACTTGGATGGCATCTACCTCCTGTTCACCTATTTCACAAAGCCGGACTCCATAAGCACCCTTGAGGAGACACTGTTAGCGGATGATAATGTTATTCGATCAATGACTTCCAAAATCAGGAAGAGGAAATATTAG 642 0.4735 MASSSLTSIPLSSSSLNIPHCCSKPSFTFLSSPSGAFAGSLKPLLAESKSHFYQKRNDSGFSVRAQTLDFSDSFFEGGFGSEEDPTSPLPGFTAVEEKEEPQCPPGLRQYETMMVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPDSISTLEETLLADDNVIRSMTSKIRKRKY* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1296 213 Pfam Ribosomal protein S6 109 207 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr2g1296 213 SUPERFAMILY Ribosomal protein S6 107 211 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr2g1296 213 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 13 213 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr2g1296 213 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 13 213 - -
Apr2g1296 213 CDD bS6_chloro_cyano 107 208 - -
Apr2g1296 213 Gene3D - 106 213 IPR014717 -
Apr2g1296 213 Hamap 30S ribosomal protein S6 [rpsF]. 107 210 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1296 K02990 - gmx:100305490 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1296 2 19169738 19171372 Apr2g1296 2 19169738 19171372 ECH