Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1294 ATGGCAAGCATTGCTGGAACATGTCCTTTAGGAGCATTGTTAAGAAACAAAGTCTCAGAAAGCAATGGGGTATCTCATGTTCAGTATGAAGGGCTTAGATTACAGCACAGAATGCATGTGCCTTCAGCTGCAAGTATGCCAACCCCTAAATGCAGCAGAATCAAGGCCATGGCATCCTCAACTGTTGCGGCACCAAAGAGAGAAACGGATCCAAAAAAGCGAGTAGTAATTACAGGAATGGGACTGGTGTCAGTGTTTGGCAGTGACATTGATGCATTTTACAACAAGCTTCTTGAGGGAGAAAGTGGGATAAGCCTAATAGATAGGTTTGATGCCTCAAACTTCTCTGTCCGTTTTGGTGGGCAGATCCGTGATTTCTCTTCAGAAGGTTATATTGATGGCAAGAATGATCGCCGCCTTGATGATTGCTGGAGGTATTGCATTGTTGCAGGCAAAAGGGCCCTTGATGATGCCAACCTTGGACATGAAATCCTAAAAATTATGGACAAAACAAGAATAGGAGTTCTGGTGGGATCAGGAATGGGGGGTTTAACAGCTTTCAGCACTGGAGTGGAAGCTCTTATACAAAAGGGATATAAAAAAATTACTCCTTTTTTCATTCCCTACTCCATCACCAACATGGGTTCTGCTTTGTTGGCTATAGACACTGGCCTAATGGGTCCAAATTATTCCATTTCCACCGCTTGTGCAACGGCAAATTACTGCTTTTATGCAGCTGCTAATCATATTAGAAGAGGTGAAGCAGATATCATGGTGGTTGGTGGGACTGAGGCTGCAATCATGCCTACTGGTGTTGGAGGCTTCATTGCTTGCAGGGCCTTGTCTCAGAGGAACGAAGACCCCAAGAAGGCTTCAAGACCATGGGACAAAGATCGCGATGGTTTTGTCATGGGTGAAGGCTCTGGTGTGCTGGTAATGGAGAGCTTGGAGAGTGCAACAAAAAGAGGAGCCAGAATAATAGCAGAATATTTGGGGGGTGCCATAACATGTGATGCTCATCATATGACTGATCCTAGGTCTGATGGACTCGGAGTTTCATCTTGCATAACCAAGAGTTTAGAAGATGCTGGGGTTTCCCCTGAAGAGGTGAACTATGTGAATGCTCATGCCACGTCAACACTAGCTGGTGACCTGGCTGAGGTTAATGCAATCAAAAAGGTTTTTAAGGACACATCAGAATTGAAAATGAATGCTACTAAATCAATGATTGGTCATGGTCTTGGGGCTGCTGGTGGTTTGGAAGCCATAGCAACAATCAAAGCAATAACAAGTGGCTGGTTGCATCCAACCATTAACCAAGATAACTTGGAGGCTAGTGTTACAATTGACACCGTCCCTAACATTAAGAAGAAGCATGAAGTTAATGTTGCTATATCCAACTCATTTGGGTTCGGTGGACACAATTCGGTGGTTGTCTTTGCCCCATTCAGGCCTTAA 1458 0.4444 MASIAGTCPLGALLRNKVSESNGVSHVQYEGLRLQHRMHVPSAASMPTPKCSRIKAMASSTVAAPKRETDPKKRVVITGMGLVSVFGSDIDAFYNKLLEGESGISLIDRFDASNFSVRFGGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKRALDDANLGHEILKIMDKTRIGVLVGSGMGGLTAFSTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAIMPTGVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLVMESLESATKRGARIIAEYLGGAITCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATKSMIGHGLGAAGGLEAIATIKAITSGWLHPTINQDNLEASVTIDTVPNIKKKHEVNVAISNSFGFGGHNSVVVFAPFRP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1294 485 SUPERFAMILY Thiolase-like 73 324 IPR016039 GO:0016746
Apr2g1294 485 SUPERFAMILY Thiolase-like 287 481 IPR016039 GO:0016746
Apr2g1294 485 Pfam Beta-ketoacyl synthase, N-terminal domain 73 319 IPR014030 -
Apr2g1294 485 PANTHER POLYKETIDE SYNTHASE-RELATED 36 485 IPR000794 -
Apr2g1294 485 Gene3D - 38 484 IPR016039 GO:0016746
Apr2g1294 485 SMART Beta-ketoacyl synthase 75 485 IPR020841 -
Apr2g1294 485 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 36 485 - -
Apr2g1294 485 CDD KAS_I_II 73 480 IPR000794 -
Apr2g1294 485 Pfam Beta-ketoacyl synthase, C-terminal domain 328 440 IPR014031 -
Apr2g1294 485 ProSitePatterns Beta-ketoacyl synthases active site. 227 243 IPR018201 GO:0004315|GO:0006633
Apr2g1294 485 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 73 480 IPR017568 GO:0006633|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1294 Apr-Chr2 19156980 19160143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1294 33 485 Acyl Lipid Metabolism Gene Families AT5G46290 74.414 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1294 K09458 - gmx:100798044 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1294 2 19156980 19160143 Apr2g1294 2 19156980 19160143 ECH