Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1278 ATGACTCTGAACTTGTGCACTCCATGCTTTTCTCGCTTACTTCATCACCCTTCTTCTTCCTCTCTTCCCAAACTCTCCGAAACCTTCTTCGCCACATCCTCACTCCCCAACCAATCCAGATTCCTCAACGCCAAAGCGTCCGTCAGCGAGAGCCACAATGAAATCTCTCACGACACTGCCTCCGATTCCGACTCACTGGACCAACAACTCCTCCTCCGAGTCGCCGCAAACGCCAAAGACGCCGACGAGGCATTACAGATGATCGCCAACACCTCTTCCCGAAACGACGGCGTCATTTCCACCTCTGATTGTTGCTCCATTATTTCCGCTGCTCTTAACCGCAATAATCCCCAACTCGCTTTGTCCATTTTCTACGCCATGCGCGCTAGTTTTCACCAAGTTGGCGAGAGTGGCATTTCGGGGGAGAGATGGAAGTGGTCGAGACCTAATGCGCATGTTTACACGTTGTTGATTCAGGGTTTGGCGGCATCGTTAAGGGTTTCTGATTCTCTTAAGGTGATTAAGTATATTTGTGAGGTCGGCGTTTCTACTGGTGAGGAGGTCCCTTTTGGGAAGATAGTGAAGTGTCCTAGTTGTCGGATAGCTGTTGCTGTTGCACAGCCACAGCAAGGTATTCAGATAGTATCTTGTGCAAAGTGTCGCTACCAATATGAACTTGTATCGGGTGACATAGTCAGGATTCAATCAGAAGAAATCAGCATGGACATTACGGCATGGGAAAGGGGGTTAAGATACCTGAAACTGATGAAGCAAAGCATTCCTGCTGCTGTTCATTCTATTGTGGTGCAGACCCCTTCTGGTATGGCTCGCACTCACAGATTTGCAACTGAGACAGTTGATCTGCCAGCACAAGAAGGCGAAAGAGTAACTATTGCTGTGGCAACTCCATCAAATGTTTATAGGAAGGTGGGCCCCTTTAAATTCAGTCCAAGGGCCCCCGATTTCTATCCTGGTGAGGCTATGTGCATAACAAACCACAAAGATGGGCGGGAATCACCACTTTTAAGAGCCCCAAGAAAAGAAGAAAATTCATCATTACTCAAACCCTCTCTTCTCTTTCCACTTATTGCTTTGCTGGCCACTGGTGATGCTGCTTCAGGACTTATTGACCCCAGCCTGCCCCAATTCCTCTCAGTCGTTGCTATTTCAACTCTTGTTGTTGGATCTACTTTGAACTCCGTTGTTCTTCCCCAGTTTAATCAGCTTCCACAGAAGTCAGTAGAAGCAATTGCTATCAAACAACGACTTCTATCTCAATATGATGTTCTTCTGTCTCGCATCAATGACCTAAAAGAAGCTGCTGAAAAAGAGATTTGGATGTTAGCTCGAATGTGCCAACTTGAGAACAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGAATCGGAGAAGTAAAGTCAAAAGGGTGCGAGAGAGCCTGCAAAACTCCCTTAGGGGACGGATTGAATTGATTGACAGCTATGCTAGGATTTCCTCGATGATTGAAATTGAAGTGGAGATGGAGACTGATGTTCTAGCCGCTGAAACTGCCAGTAATGTGCTGAGGGTTCATGTTTTGCAGGATAGTATCACAGAACAGATAGAACAAATCATGGAGCTTGAAAATTTGGAGGAGAGATGGAAAATACAAGCAGAAGCCAATGATGAGGCTGAAAGGCTTCTTAGTTCCCAGCCCATGCCTTTGGAAGAAGTTTAA 1716 0.4621 MTLNLCTPCFSRLLHHPSSSSLPKLSETFFATSSLPNQSRFLNAKASVSESHNEISHDTASDSDSLDQQLLLRVAANAKDADEALQMIANTSSRNDGVISTSDCCSIISAALNRNNPQLALSIFYAMRASFHQVGESGISGERWKWSRPNAHVYTLLIQGLAASLRVSDSLKVIKYICEVGVSTGEEVPFGKIVKCPSCRIAVAVAQPQQGIQIVSCAKCRYQYELVSGDIVRIQSEEISMDITAWERGLRYLKLMKQSIPAAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTIAVATPSNVYRKVGPFKFSPRAPDFYPGEAMCITNHKDGRESPLLRAPRKEENSSLLKPSLLFPLIALLATGDAASGLIDPSLPQFLSVVAISTLVVGSTLNSVVLPQFNQLPQKSVEAIAIKQRLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPSYRNRRSKVKRVRESLQNSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNVLRVHVLQDSITEQIEQIMELENLEERWKIQAEANDEAERLLSSQPMPLEEV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1278 571 Coils Coil 420 440 - -
Apr2g1278 571 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 27 570 - -
Apr2g1278 571 Coils Coil 523 560 - -
Apr2g1278 571 Gene3D Tetratricopeptide repeat domain 38 196 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1278 - - gmx:100781803 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1278 2 19029485 19037217 Apr2g1278 2 19029485 19037217 ECH