Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1274 ATGGATGATAGTCCTTCAAAATTAAAGATCATCCCTGATCACTTTCAAATTCCAACATCAAGTATAGAATCTCCAGAGAGCAGAACATCATCTATTACAGAACCTGCAACTGATCAATCTTCGCGGTCCTTGCACCATCAGCGGACTCGAAGAAAATTAAGGACAGCTTTCATGTTGAACTTGTTTACTCTACGAGGGCTGCCATGGGGGTCCAGTAGTGGAGGTCAGGAAAAGGTTGAGCTAACAGTTGCAGAACTAGAGTCACTTCGATCAGAGCTTGCTGATATAGAGGAGAGGGAAGCTCACTTGAAAGCTCAGTTGGAACATGTTGATGAAGTTTTGCGGTCCGCTCGCCTATCTGGTTATTTATACATTCGAACTAGATGGGCAGCACTACCGGGAGAACCTCCACCTATAGATGATACTGAAGTAGATGATTGGCTTCCTCGTTTTGTTGTTCTCCATGGAGAATGTATATTTTTATATTTGTTATGTACAGATCTAAGCCCCCAGGACTCGACCCTTCTATCTGATATCGTTGAAGTAGGGAAATTACCGTGTTTAAAGCGAGAAGATAATGAAATTCAACATGCCTTCTATATTTTAACGCGTCATGGATTACGCTATGAGTGCTCAAGCAGTTCGAAGATACAGGTGGACTCATGGTTATCAGCATTACAGAGTGACTGCAAATTGGAATCTGATACATCAGTTTGCAAATCTGCTTCCAGAGCTGCAAGGTCCCTTCTCTCTGCTTCTAAGGCTTCTCGTTTTCACCATCAAGGACGTGCGGTGGGGGCTGCTGCGGCTGTTTCATTCAGCAGCAAAGTGCCTTTTTTGGCTTCAAATTATGGGAGAGGCGGTTCTGAAAGTGGATCCAAATCGTGGATTTCAGGGGCTCTTGCTCTTCCTGCTGCAGCTTACTTGTTCCAAGATCAGGAGGTGCATGCAGCTGAGCTGGAGCGCACTTTCATTGCCATTAAGCCTGATGGAGTGCAGAGAGGGCTGATTTCTGAGATTATATCTCGTTTTGAGAGGAAAGGATATAAACTTGTGGGAATTAAAGTAGTGATTCCATCAAAGGAATTTGCCCAACAGCATTATCATGACCTGAAGGAAAGACCCTTCTTCAATGGGCTGTGTGAATTCCTAAGCTCTGGCCCTGTTGTTGCAATGGTGTGGGAAGGAGAAGGAGTTATTTCCTATGGCAGAAAACTAATCGGTGCCACTGATCCACAGAAATCAGAACCTGGAACCATTAGGGGTGACCTAGCTGTTGTTGTTGGAAGAAATATCATCCATGGGAGTGATGGTCCACAGACTGCAAAGGATGAGATAAAGTTGTGGTTTAAGCCAGAGGAGTTGATTAGTTTCACAAGCAATGCAGAGAAGTGGATTTATGGTGCCAATTGA 1413 0.4423 MDDSPSKLKIIPDHFQIPTSSIESPESRTSSITEPATDQSSRSLHHQRTRRKLRTAFMLNLFTLRGLPWGSSSGGQEKVELTVAELESLRSELADIEEREAHLKAQLEHVDEVLRSARLSGYLYIRTRWAALPGEPPPIDDTEVDDWLPRFVVLHGECIFLYLLCTDLSPQDSTLLSDIVEVGKLPCLKREDNEIQHAFYILTRHGLRYECSSSSKIQVDSWLSALQSDCKLESDTSVCKSASRAARSLLSASKASRFHHQGRAVGAAAAVSFSSKVPFLASNYGRGGSESGSKSWISGALALPAAAYLFQDQEVHAAELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVVIPSKEFAQQHYHDLKERPFFNGLCEFLSSGPVVAMVWEGEGVISYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPQTAKDEIKLWFKPEELISFTSNAEKWIYGAN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1274 470 ProSitePatterns Nucleoside diphosphate kinases active site. 431 439 IPR023005 -
Apr2g1274 470 MobiDBLite consensus disorder prediction 1 47 - -
Apr2g1274 470 Coils Coil 79 113 - -
Apr2g1274 470 PANTHER OS05G0595500 PROTEIN 1 238 - -
Apr2g1274 470 CDD NDPk_I 321 450 - -
Apr2g1274 470 SMART ndk_5 320 457 IPR034907 -
Apr2g1274 470 PRINTS Nucleoside diphosphate kinase signature 323 345 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr2g1274 470 PRINTS Nucleoside diphosphate kinase signature 367 386 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr2g1274 470 PRINTS Nucleoside diphosphate kinase signature 387 404 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr2g1274 470 PRINTS Nucleoside diphosphate kinase signature 408 424 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr2g1274 470 PRINTS Nucleoside diphosphate kinase signature 431 450 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr2g1274 470 CDD PH 119 226 - -
Apr2g1274 470 SUPERFAMILY PH domain-like 112 228 - -
Apr2g1274 470 MobiDBLite consensus disorder prediction 17 42 - -
Apr2g1274 470 Gene3D - 101 230 IPR011993 -
Apr2g1274 470 PANTHER OS05G0595500 PROTEIN 1 238 - -
Apr2g1274 470 Hamap Nucleoside diphosphate kinase [ndk]. 320 455 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr2g1274 470 Gene3D - 316 470 IPR036850 -
Apr2g1274 470 ProSiteProfiles PH domain profile. 116 231 IPR001849 -
Apr2g1274 470 Pfam Nucleoside diphosphate kinase 321 454 IPR034907 -
Apr2g1274 470 SUPERFAMILY Nucleoside diphosphate kinase, NDK 320 467 IPR036850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1274 Apr-Chr2 18986651 18997680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1274 - K00940 pvy:116139377 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0526 7 11703595 11707560 Apr2g1274 2 18986651 18997680 PCT