Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1260 ATGGTAAAACATCGCTTCAGAGAGTCTATAAAATCTTTGTTGGGAAGTCACATTGACCCTGATAAAGAAGAGCAGCTTCGTGGAACTAAAGCAGAAGTTGAAGACAAAGTGAAAAGCCTGTTGAAACTTATTAAAGATGACAACCTTGAGGAGGGTGGAACCCCATTAGAACTTTCTAAGAAGGAATCACTTGTTGAACTGATTGAGGATTTCCACAATCAATACCAATCACTGCATGCACAATATGATCATCTAACTGGCGAGTTAAGGAAAAGGATTAAGGGCAAGCTAGAAAAGGGGAGTTCTTCATCTAGCTCAGACTCAGATTCGGATCATTCTTCAAAGGAAAAAGACAACAAAAATGGACAACTGGAAAATGAATTTCAAAAGACAACTGATAAGCAGCAAGAACTTGAAGTGGCTGACTTAAATCGGAAGTTGACTATCACACAGGAAGAGAAGGAGGATCTTAATTCGAAATATCTCGCAGCATTGAGCAAGATACAAGAAGCAGAAAAAAATAACATGGATTTGAAAACTGATGCTGAAGCATTACGCACTCAAGGATCAAAACTTTTGGTTGAGAATGCTGAACTAAATAAACAACTGGGCGTTGCAGGTAAAATAGAAGCTGAACTGAGTCAACGATTGGAAGACTTAAAGACAGAAAAAGATAGTTTGACCACGGAGAAAGAGACAGCTCTCCAACAGATTGACGAGGAAAAGAAGGCTACTGAAGGCCTGAGAATCACTGTTGATCAACTGAAAGATGATAAATTAGCCCTTGAGAAAGAGCTACAGTCGGTTACTGGTCAACTTCCTATTCTGAAACAGCAGTTGGAACATTCAGGACAGGAAATGACAAATATAATCCACAAACTGAAAGTCAGCGAGGAAGAAATGAAAAACGAGATTCAGCTGGCTCACAACAAAATACAAGAATTGGAAGCTGAATCAAGTCAATTAAAGGAGAAACTTAATGATAGAGAAAGGGCAATTTCGGCCCTCACTCAGATGCATGAAGGGCATCGGAAAGAAACCTCAAATCAACTCAGGGACCTAGAGGCAAAAAACACAGACCTTGAGCGGGAAGTAGAATCACTACAAAAACAGAGAAAATATATGGAACAGCTAATTAGGCACACTGCCGAACTAAAAAACCAACTTTCAGAAATTCAAACGAATTCCAATGAGCGAGAAGAGTTGCTAGTTTCTCTCTCGAAGGAATATAAAGATCTTGCCAATGAGTCTGAGTCTAAAATATCTGATTTGAAATCTCAGATAAACAATCTGCTGACTGATATAGACACGTTGAATGCCCAGAAAAGTGAACTGGAGGAGCAGATAATTTGTAAAAGTGACGAAGCTTCAACTCAAGTCAAAAACATTAGAAATGAACTGAATGTGTTGCAGCAGGAAGTGGAGTCCCTACAACAACAGAAATCTGACATGGAAGTTCAGTTGGGGGAAAAAGTCCGAGAAAACTCTGAGAATGTGATTCAAATACAAACACTCAAAGAGGAGATTGACAGAAAAACCCTGGAACAAGAGAGACTTCTTGAAGATAGAGAAAATTTAGCCATGCAGATAAGGGCTTTGGAATCAGAGGTGAGCACTATAAAGAACCTAAAGAGTGAAGATGAAGAGAAAATAAGTGCTAACAGCCATGAGATCAGTTGTCTAAGACAGGAGAAGTTGGAGCTATGTGACAAAGTAGCTCAATTAGAGAAAATATCAGCAGAGAAAGAATCGGAGTTCTTTGCTCTCCAGGATAGACTTAACAAGGCAGAGGAAGAGGGTTCAGCTCAAATAATGGCCTTCACTGAACAAATTAAGAATCTTAACCATGATTTGGCGTCCCTGCAGAATGAGAAAGAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGTTGGAGGTGGATTCCATTCACAACAAGAAGAGTGAAGTTGATGAGCAAATGAGAGCTAAAGACCATGAGAACACTGAGCTGAGAGAGAAAATTTTGGGATTGCAGGGCACAATTACTGAGTTGGAGAAAACATTGGCTGAGAGAAAGGTAGAATTATCTACTTTACAGGAAAAGCTTCACGAAAAAGAGAGTGAGGCTTCAGGTCATGTAATTGCCTTCACAGCCCAAATTGATAATCTGCAGAAAGACTTGGTTTCCTTACAGGAAAAGAAAGAAGAATTGGAGCTCCACTGTGAAAAAGTTAGAGAAGAACATGCAGAAAGACTTATAATGTTGGAGAACGAAAAGAATGACATAGCAAGCAAAAATGTGGATCTTAAGAGAACGTTGGAAGAACGAGAAGATGCATATCGGAAGTTGAATGAAGAATATAAACAAATTGATAGTTTGTTTGAGGAATGCAAGGTCAAACTTGGGGTTGCAGAGAAGAAGATTGAAGAAATGGCTGGAGAGTTTCATGAAGGCATTGAGTCGAAAAATCAGATGGTAGCTGATTTGGAACATACAGTAGAACACCTGAAAAGAGACGTAGAAGAGAAGGGAGATGAAATCAGTACTTTGCTTGAGAATGTCCGGATGCTTGAGGTTAAGCTTCGTTTGTCAAACCAGAAGCTCAGGGTCACGGAACAATTGCTAAGTGAGAAAGAAGACAGCTTTCGAAAGACAGAAGAAAAGTTTCAGCAAGATCAGAGAGCACTTGAGGACAGGAATGCTGGTTTGTCAGCAATAATAACTTCCAACAATGAAGCTTTTGCTGAAATTGTCTCTAACATTAAAGACTCCGTGAACAGTGTCATGACTGGCATAGAAGCCGTAAGCTTGAAAATTTCTGATGACTGTAGAAATTACGATGACTGTATCTCAAACATCTCACATGAGCTTGAGGTTGCAAAAGACACTATCAGGGAGATGAATAAGGAAAAACAGCAGTTAAAGAAACAGAAAAGCAACTTGTTGGAGCAGCTGCAGGGTAAAAGTGCACAGGAATTGGCTTTGAGGAAGAGTGTTGAGAAGCTAGAGGCAAAGGCAAGCAAGGAGGAGTCGGAGAAGGTGAATCTGACAACAACTGTTGTTCAACTTAAGAAGACAGTTGGAGAACTAGAGAAAATGATGAAAGAGAAAGAAGAGGGTATGTTGGACTTGGGGGAGGAGAAGAGGGAGGTCATTAGGCAACTGTGTTTGTGGATTGATTATCACCGCAGTCGTTATGATTATCTAAAGGACATTCTATCCAAGACTCGCAGAGGGCAGAGAGCAGCATAA 3231 0.3996 MVKHRFRESIKSLLGSHIDPDKEEQLRGTKAEVEDKVKSLLKLIKDDNLEEGGTPLELSKKESLVELIEDFHNQYQSLHAQYDHLTGELRKRIKGKLEKGSSSSSSDSDSDHSSKEKDNKNGQLENEFQKTTDKQQELEVADLNRKLTITQEEKEDLNSKYLAALSKIQEAEKNNMDLKTDAEALRTQGSKLLVENAELNKQLGVAGKIEAELSQRLEDLKTEKDSLTTEKETALQQIDEEKKATEGLRITVDQLKDDKLALEKELQSVTGQLPILKQQLEHSGQEMTNIIHKLKVSEEEMKNEIQLAHNKIQELEAESSQLKEKLNDRERAISALTQMHEGHRKETSNQLRDLEAKNTDLEREVESLQKQRKYMEQLIRHTAELKNQLSEIQTNSNEREELLVSLSKEYKDLANESESKISDLKSQINNLLTDIDTLNAQKSELEEQIICKSDEASTQVKNIRNELNVLQQEVESLQQQKSDMEVQLGEKVRENSENVIQIQTLKEEIDRKTLEQERLLEDRENLAMQIRALESEVSTIKNLKSEDEEKISANSHEISCLRQEKLELCDKVAQLEKISAEKESEFFALQDRLNKAEEEGSAQIMAFTEQIKNLNHDLASLQNEKEELEQQCEKLKLEVDSIHNKKSEVDEQMRAKDHENTELREKILGLQGTITELEKTLAERKVELSTLQEKLHEKESEASGHVIAFTAQIDNLQKDLVSLQEKKEELELHCEKVREEHAERLIMLENEKNDIASKNVDLKRTLEEREDAYRKLNEEYKQIDSLFEECKVKLGVAEKKIEEMAGEFHEGIESKNQMVADLEHTVEHLKRDVEEKGDEISTLLENVRMLEVKLRLSNQKLRVTEQLLSEKEDSFRKTEEKFQQDQRALEDRNAGLSAIITSNNEAFAEIVSNIKDSVNSVMTGIEAVSLKISDDCRNYDDCISNISHELEVAKDTIREMNKEKQQLKKQKSNLLEQLQGKSAQELALRKSVEKLEAKASKEESEKVNLTTTVVQLKKTVGELEKMMKEKEEGMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDILSKTRRGQRAA* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1260 1076 Coils Coil 706 786 - -
Apr2g1260 1076 Coils Coil 210 272 - -
Apr2g1260 1076 Coils Coil 558 599 - -
Apr2g1260 1076 Coils Coil 943 1033 - -
Apr2g1260 1076 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Apr2g1260 1076 Coils Coil 502 550 - -
Apr2g1260 1076 MobiDBLite consensus disorder prediction 109 124 - -
Apr2g1260 1076 PANTHER COP1-INTERACTIVE PROTEIN 1 1 635 - -
Apr2g1260 1076 PANTHER COP1-INTERACTIVE PROTEIN 1 632 1075 - -
Apr2g1260 1076 Gene3D - 210 381 - -
Apr2g1260 1076 Gene3D - 602 769 - -
Apr2g1260 1076 Pfam KIP1-like protein 15 83 IPR011684 GO:0003779
Apr2g1260 1076 Coils Coil 344 494 - -
Apr2g1260 1076 Coils Coil 298 332 - -
Apr2g1260 1076 Coils Coil 121 188 - -
Apr2g1260 1076 PANTHER COP1-INTERACTIVE PROTEIN 1 1 635 - -
Apr2g1260 1076 PANTHER COP1-INTERACTIVE PROTEIN 1 632 1075 - -
Apr2g1260 1076 Coils Coil 604 652 - -
Apr2g1260 1076 Coils Coil 660 701 - -
Apr2g1260 1076 MobiDBLite consensus disorder prediction 95 137 - -
Apr2g1260 1076 Coils Coil 812 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1260 Apr-Chr2 18856138 18861971 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1260 - - aprc:113854560 1936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1260 2 18856138 18861971 Apr2g1260 2 18856138 18861971 ECH
Apr7g0538 7 11824479 11826680 Apr2g1260 2 18856138 18861971 PCT