Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1237 ATGAAGTGCAGATCGGTGGCGTGCATTTGGTCAGGCACGCCCTTCCCTCACAATATCACCGCCGTCGCCGCCTTCACCGGACCACCGACACCAACATTTTACACCGCCGGATCCGATGGCTCCATCATCTGGTGGACCCTTTCCCCTTCCAATTCCACCTCCACACCGCATGTTAATGCAGTGGGCGTGTTGTGTGGTCACGCAGCACCGGTCACCAATCTCGCCCTTTGCTGTCCCGTCGCAGCAGAGCAAAACGGTATTGGTTCAAGTGGAAGTAGATGTAGTGCGTTGATAAGTGCGTGTTGCGATGGGTTTTTGTGTGTGTGGAGTAAAAATAGTGGTCATTGTCGGTGTAGGAGAAAATTGCCACCCTGGGTAGGCACTCCTCGTATAATTAAAACTTTGAATTCGACGCCGAGATATGTGTGTATAGCTTGTTCTTTTGTGGATTATTCTGTGGAAGGAAATGAAGGTTTAATTGATAGAGAAACACAGCTTAGGAAACCCTCTAAATGCACTATTCTTATTGTTGACACATATTCACTTTCCATTACACAAACTGTGTTTCATGGAAATCTATCCATTGGTCCTGTCAGGTTTATGGCACTAGTGTTAGGTGATGATGAGAAGAGGAATTCTGTGTTTGTGGCTGATTTAGCTGGGAAGCAACAGATGGTCTCGATGTCGGAGGATCCTCGTGATTATGGGGAGGGTTTGACGAGTTCACATGGAGATAAAGCTCCGTTGGAAAGTTCTATTTGCTCTGAGGGATTGAGTGGTGTGGAGCAAGTTATTTCAGTTTTGACCTATGGGAGCCTTGTTGCTTTTATATTGAAAGATCGCTGCATATTTAGGTTATTCTCTAGTGATGGCAATATTGGAGAGGTTTCTTTTATGGATAATTTTTTCAGTTTGGATCGGCATTCTACTCCAACACATGCTATTGGTGGCATTTTTCTTGAGAGTGATGATGTGGGCAATATGGGCAGTACCCATGAAAACTTGATTCCGGTATACTTTGTTGTGTGGAATAATATAGGTTATGCAATTATATATAAAATATCGTATCAGAATGATGTTTTTCATTGTGAACCTCATTCTGAGATTCCTGCTACTCATTATCAACCTGATATGAGATTATCTATCTTTTTCCTACAAGTAAATCAATATCTTGTGTGCATCAAGTCAGTGTGCTTTCATTATGAGGAACCTTTGCTATGGAGACCACTTGTCACGATTTGGTCACCGTATCATTTTGATGATAGACCTGGTAAATTGTACCGTCAATGCAGAATGATTAGTGATGGTGCATCTTTCACCAACTGGTTTGAGAAGTCTGCTCAGCTCAAGGGACTGGATGATCTTGAGACTATGTCCACTTTTGGTGTGAGTCCAAGTTCTGATGATGTAGACAATGCACATGTGGATAGCTTAAGCAATTATTATACTTACAAGGGGAAGGTAGTGTCTTCTTCCATGATTATCTCTGAGAACCTCTTTACTCCTTATGCTGTTGTGTATGGGTTTTTAAGTGGAGAAATAGAGGTTGTAAGATTTGATCTGTTTCAAGGCATTTGCTTGGATGGTGTAAGTTCCAACCCTGACGAAAAGTCAACTTCCTGTAAACAGTACTTCTTAGGACATACAGGTGCTGTACTTTGTCTGGCAGCACATCAAATGATGGGTAGTGCCAAAAGCTCGACTTTTAAACGGGTTTTGCTGTCTGGAAGTACAGATTGCACAGTTCGTGTATGGAATCTTGACAGTGGCAGTCTTATTATGGTAATGCATCATCATGTGGCTGCAGTGCGTCAAATTATTCTTCCCCCTTCTTTGACTGCACATCCTTGGAGTGATTGTTTTCTTTCAGTTGGAGAAGATGCATGTGTTGCTCTTGTTTCTCTTGAGACTCTGCGAGTGGAAAGAATGTTTCCTGGACACATGAACTATCCTTCAAAAGTTTTATGGGATGGAGCACGGGGTTATATTTCCTGTCTATGTCAAACACATTATGGAACTTCTGATGCTGCTGATGTATTATACATTTGGGATGTAAAGACAGGTTCACGTGAGCGAGTCTTACGCGGACCAGCTTCACATTCAATGTTTGATCATTTTTGTAAAAGTATCAGCATGAATTCCATATCTGGTACTTTGCTGAATGGAAATACATCAGTCTCTTCATTACTTCTTCCAATAGTTGATGATGCAAGGTTCTCTAACTCTCCCATAAGTCTGTCAGAGAACTTGCTTACTTCATCAAGGTCTTCCCCAAATATTTCAAATATGACTGAGCTGAATTCTTCCAAAACAAATGCAGGTAAAGTAAGTTCAGCAAAGCCAAATTCATCCCCTCTGATTGGTGTCTTGAGTAACAAGCTTCCTATCAAATGCTCTTGCCCATTCCCTGGGATTGTTACTCTGAGTTTTGATCTTGCCTCATTGATGTTCTCTTATCAAAAGAACGAGTCCATGGAAAATGGTGGTGGCAAACCAATGAATAGCAATTTGAAGCAGCAGGGAGTCCAGGAGCAAAATCCTGGCTACCATAATCCGGAAACTTTAGAGGGGCACGACTGGGTTAGCCTATTTGAAGAATACTTAGTTCGATATAGCTTATCATTTCTACATTTGTGGAGTGTAGACAGAGAGCTTGATAATTTGCTGATAAGTGACATGAAGCTGAGGAGACCAGAAAATTTTATAGTAGCTTGTGGTCTGCAGGGGGATAAAGGATCCTTGACATTGACATTTCCTGGTCAGAGTGCTATTTTTGAGCTCTGGAAGTCATCATCTGAGTTTTGTGCAATGAGGTCATTGACGATGGTGTCCCTTGCCCAGCGTTTAATTAGCTTGTCTCACTCTAGTTCTGCAGCAAGCAGTGCTTTAGCAGCATTTTATACTCGAAATTTTATGGAAAATTTTCCAGATGTGAGGCCACCTTCATTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGAATGGCTGCACGCTCTATATTTCATTGTGCTGCCTCTCATGCTGTTCCTCTACCTCTATGCAATTCAAAACCTACTAAGTCAACTAGTATGAGCTCCAAAACTGGAAGTAGAGACAAACATCTAGGAAATATGACAGTAGAAAGCATATCTCCCAAGGCAGAAAAACGAGGAATTTCCCATGATGAGCAATCCAAGATTCTTGCTTGGCTAGAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGTGGAACAAGTCAGGATGCAATGACATCTCACATTATTGTTGCCGCTGCACTGGCTATCTGGTACCCCAGTCTTGTAAAGCCATGTCTTGCCATGTTAGTTGTTCATCCATTAATGAAGTTGGCTATGGCTATGAATGAGAAGTACAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGTACATGGAAAGAATGCATTGTCTCTGAGATTCCTCGTCTGATTGGGGATGTCTTTTTCCAAGTAGAGTTGAGTGGTCCATCTTCCAAATCAGTGCCAGAAATTTCAGATGCCTCTTTTTCTATTAAAAAGACTTTGGTGGAGGTTCTTCTTCCAACTTTAGCTATGGCTGATATACCTGGCTTTTTGTCTGTGATAGAAAGCCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACATGGTGTCCTTGTTGACTCTTATAAGGATTATGCATGGTTCTCCCAAGAATTTGGCTCAATACCTTGACAAGGTGGTGAACTTCATTTTACAGACTATAGATCCTAGCAACTCAGTCATGCGGAAGGCATGCTTTCAGAGTTCAATGACAACTTTCAAGGAAGTTGTGCGTGTATATCCTATGGTTGCTGTCAATGATTCGTGGACCAGACTAGCAGTTGGAGATGTGATTGGAGAAATTAAGACTGCAAGCATTAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAACTCTGCTCACAGCAGCGACAGCAGGAACATTGACTACTGCAATTTCAGCACTGAGCTTTTCACCCGATGGAGAGGGGCTGGTTGCTTTTTCTGAACATGGGTTACTGATTAGATGGTGGTCACTGGGATCTTTCTGGTGGGAGAAACTAAGCAGGAACTTTATTCCTGTCCAGTGCACCAAATTAATCTTTGTTCCTCCTTGGGAAGGATTTTCACCTAATTCATCCAGGTCAAGCATAATGGCCAATATTTTGGAAACTGACAGGCAGTTGAACTTTCAGGATAATGCGAGGGATTCAAATCATGCTGACAGTTTGAAACAACTGCTTCATAATCTGGACCTCTCCTATCGACTAGAATGGGTTGATGGCCGGAAAGTACTACTTACAAGGCATGGTCATGAATTAGGCACTTTTCAGTTATAA 4416 0.4219 MKCRSVACIWSGTPFPHNITAVAAFTGPPTPTFYTAGSDGSIIWWTLSPSNSTSTPHVNAVGVLCGHAAPVTNLALCCPVAAEQNGIGSSGSRCSALISACCDGFLCVWSKNSGHCRCRRKLPPWVGTPRIIKTLNSTPRYVCIACSFVDYSVEGNEGLIDRETQLRKPSKCTILIVDTYSLSITQTVFHGNLSIGPVRFMALVLGDDEKRNSVFVADLAGKQQMVSMSEDPRDYGEGLTSSHGDKAPLESSICSEGLSGVEQVISVLTYGSLVAFILKDRCIFRLFSSDGNIGEVSFMDNFFSLDRHSTPTHAIGGIFLESDDVGNMGSTHENLIPVYFVVWNNIGYAIIYKISYQNDVFHCEPHSEIPATHYQPDMRLSIFFLQVNQYLVCIKSVCFHYEEPLLWRPLVTIWSPYHFDDRPGKLYRQCRMISDGASFTNWFEKSAQLKGLDDLETMSTFGVSPSSDDVDNAHVDSLSNYYTYKGKVVSSSMIISENLFTPYAVVYGFLSGEIEVVRFDLFQGICLDGVSSNPDEKSTSCKQYFLGHTGAVLCLAAHQMMGSAKSSTFKRVLLSGSTDCTVRVWNLDSGSLIMVMHHHVAAVRQIILPPSLTAHPWSDCFLSVGEDACVALVSLETLRVERMFPGHMNYPSKVLWDGARGYISCLCQTHYGTSDAADVLYIWDVKTGSRERVLRGPASHSMFDHFCKSISMNSISGTLLNGNTSVSSLLLPIVDDARFSNSPISLSENLLTSSRSSPNISNMTELNSSKTNAGKVSSAKPNSSPLIGVLSNKLPIKCSCPFPGIVTLSFDLASLMFSYQKNESMENGGGKPMNSNLKQQGVQEQNPGYHNPETLEGHDWVSLFEEYLVRYSLSFLHLWSVDRELDNLLISDMKLRRPENFIVACGLQGDKGSLTLTFPGQSAIFELWKSSSEFCAMRSLTMVSLAQRLISLSHSSSAASSALAAFYTRNFMENFPDVRPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAVPLPLCNSKPTKSTSMSSKTGSRDKHLGNMTVESISPKAEKRGISHDEQSKILAWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPCLAMLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECIVSEIPRLIGDVFFQVELSGPSSKSVPEISDASFSIKKTLVEVLLPTLAMADIPGFLSVIESQIWSTASDSPVHMVSLLTLIRIMHGSPKNLAQYLDKVVNFILQTIDPSNSVMRKACFQSSMTTFKEVVRVYPMVAVNDSWTRLAVGDVIGEIKTASIRVYDMQSVTMIKVLDASGPPGLPTLLTAATAGTLTTAISALSFSPDGEGLVAFSEHGLLIRWWSLGSFWWEKLSRNFIPVQCTKLIFVPPWEGFSPNSSRSSIMANILETDRQLNFQDNARDSNHADSLKQLLHNLDLSYRLEWVDGRKVLLTRHGHELGTFQL* 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1237 1471 ProSiteProfiles Trp-Asp (WD) repeats profile. 573 595 IPR001680 GO:0005515
Apr2g1237 1471 SUPERFAMILY ARM repeat 943 1302 IPR016024 -
Apr2g1237 1471 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1471 - -
Apr2g1237 1471 ProSitePatterns Trp-Asp (WD) repeats signature. 573 587 IPR019775 -
Apr2g1237 1471 MobiDBLite consensus disorder prediction 755 779 - -
Apr2g1237 1471 SMART WD40_4 589 634 IPR001680 GO:0005515
Apr2g1237 1471 SMART WD40_4 1334 1371 IPR001680 GO:0005515
Apr2g1237 1471 SMART WD40_4 5 46 IPR001680 GO:0005515
Apr2g1237 1471 SMART WD40_4 538 586 IPR001680 GO:0005515
Apr2g1237 1471 SMART WD40_4 57 110 IPR001680 GO:0005515
Apr2g1237 1471 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 547 614 - -
Apr2g1237 1471 SUPERFAMILY WD40 repeat-like 20 698 IPR036322 GO:0005515
Apr2g1237 1471 SUPERFAMILY WD40 repeat-like 1284 1375 IPR036322 GO:0005515
Apr2g1237 1471 Gene3D - 3 170 IPR015943 GO:0005515
Apr2g1237 1471 Pfam WD domain, G-beta repeat 541 586 IPR001680 GO:0005515
Apr2g1237 1471 Gene3D - 501 799 IPR015943 GO:0005515
Apr2g1237 1471 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1471 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1237 K24738 - gmx:100816646 2476.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1237 2 18602355 18612673 Apr2g1237 2 18602355 18612673 ECH