Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1232 ATGCCTTCTTCTTCAGTTCGCAGACTCACAATGGCAGCAATATCCAACTCCTTGCCACTGAAGCAGGGTCTCTCTGTCGGGCGTCCCCAATCAACCTTTCTCACTCGCACTCGTGCTCGTCCTCCTTCAACTTCTCTCGCATTCAGAAACTTCCAAAGATGTTACGCCGCTTTCGCAAATGAGAATCGCGAGTTCGTTATTGTTGGCGGTGGAAATTCCGCGGGTTATGCTGCGCGCACTTTCGTCGAGCACGGCATGGCTGATGGTCGCCTTTGTATTGTGACCAAAGAGCCATATGCACCCTACGAGCGTCCCGCTCTGACGAAGGCCTACTTGTTCCCGCCGGATAAGAAACCAGCGCGTCTTCCCGGTTTTCACACTTGTGTTGGATCTGGTGGTGAAAGGCAGACTCCGGAGTGGTACGAAGAGAATGGGATTGAGATGTTGTATAAAGATCCAGTAAAAGATATTGATATTGAAAAGTATACTTTGACAACAGAGTCTGGAAAACTTGTGAAGTATGGTTCACTTATTATTGCTACAGGATGTACGGCATCAAGGTTTCCTGAGAAAATTGGGGGAAACCTACTTGGTGTTCACTATATCCGGGATGTTGCAGATGCTAATGCACTGATTTTGTCATTGGAAAAAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGTTACATAGGAATGGAGGTTGCTGCTGCAACTGTTGGTTGGAAACTTGATACAACAATCATATTTCCTGAAGACCACCTTTTACAAAGACTGTTCACTCCTACTCTTGCCCAGAGGTATGAAGAACTATATCAAAAGAATGGAGTCAAAATTTTGAAGGGTGCCTCAATACAAAATTTGGAAGCTGGTTCTAATGGACATGTAGCTGCTGTGAAACTTAGGGATGGATCTATTGTGGAAGCAGATACGGTGATAATAGGCATTGGGGCCAAACCTGCTGTGAGTCCCTTTGAGAGGGTGGGTCTGAATACGGATGTTGGTGGTATACAGGTTGATGGTCTTTTCCGGACAAACATTCCTGGAATCTTTGCAATTGGTGACGTAGCAGCTTTCCCTTTAAAGATCTATAATCGTATTGCACGAGTGGAACATGTAGATCATGCTCGTCGCTCAGCACAGCACTGTGTGAAAGCATTACTCACTGCACAGACTCACACGTATGATTATCTTCCATACTTCTACTCACGGGTTTTTGAATATGAAGGGAGCCCTAGGAAAGTATGGTGGCAATTCTTTGGAGACAATGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAAATAGTTATCTTCTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTTCTAGAAAGTGGGAGCCCTGAGGTACTGATCAGTTGCTGCCGTATTTCAACAATTCACAATGTAGTAGATATTAGAATTAGATATGTACATATGCAGTTGTTTGCCAAAAGATGGTGGCATGTTTATGGAAAAGTGGAATTTCAGCTCCTGCCTAAACTAGCCAGAAGTCAGCCTTTGATTGATAAAGCCAAACTTCAAAATGCAACTTCAGTGGAGGAGGCCCTAGACATTGCTCGGGGATCCTTGCAAGTTGAAGCTGCTGTCTAG 1614 0.443 MPSSSVRRLTMAAISNSLPLKQGLSVGRPQSTFLTRTRARPPSTSLAFRNFQRCYAAFANENREFVIVGGGNSAGYAARTFVEHGMADGRLCIVTKEPYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYEENGIEMLYKDPVKDIDIEKYTLTTESGKLVKYGSLIIATGCTASRFPEKIGGNLLGVHYIRDVADANALILSLEKAKKVVVVGGGYIGMEVAAATVGWKLDTTIIFPEDHLLQRLFTPTLAQRYEELYQKNGVKILKGASIQNLEAGSNGHVAAVKLRDGSIVEADTVIIGIGAKPAVSPFERVGLNTDVGGIQVDGLFRTNIPGIFAIGDVAAFPLKIYNRIARVEHVDHARRSAQHCVKALLTAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIVIFWIESGKLKGVLLESGSPEVLISCCRISTIHNVVDIRIRYVHMQLFAKRWWHVYGKVEFQLLPKLARSQPLIDKAKLQNATSVEEALDIARGSLQVEAAV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1232 537 PRINTS Pyridine nucleotide disulphide reductase class-I signature 64 86 - -
Apr2g1232 537 PRINTS Pyridine nucleotide disulphide reductase class-I signature 220 245 - -
Apr2g1232 537 PRINTS Pyridine nucleotide disulphide reductase class-I signature 308 322 - -
Apr2g1232 537 PRINTS Pyridine nucleotide disulphide reductase class-I signature 348 355 - -
Apr2g1232 537 SUPERFAMILY FAD/NAD(P)-binding domain 64 407 IPR036188 -
Apr2g1232 537 Pfam Pyridine nucleotide-disulphide oxidoreductase 65 378 IPR023753 GO:0016491
Apr2g1232 537 Gene3D - 188 315 IPR036188 -
Apr2g1232 537 PRINTS FAD-dependent pyridine nucleotide reductase signature 66 85 - -
Apr2g1232 537 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Apr2g1232 537 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
Apr2g1232 537 PRINTS FAD-dependent pyridine nucleotide reductase signature 307 323 - -
Apr2g1232 537 PRINTS FAD-dependent pyridine nucleotide reductase signature 333 355 - -
Apr2g1232 537 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 495 536 - -
Apr2g1232 537 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 18 471 - -
Apr2g1232 537 Gene3D - 398 473 IPR016156 GO:0016491|GO:0050660
Apr2g1232 537 PANTHER APOPTOSIS-INDUCING FACTOR 1 495 536 - -
Apr2g1232 537 PANTHER APOPTOSIS-INDUCING FACTOR 1 18 471 - -
Apr2g1232 537 Gene3D - 66 381 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1232 Apr-Chr2 18561456 18566408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1232 25 397 Acyl Lipid Metabolism Gene Families AT1G48030 25.485 9.79e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1232 K08232 - gmx:100819919 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1232 2 18561456 18566408 Apr2g1232 2 18561456 18566408 ECH