Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1231 ATGCCTGCAACAACAGAGAATAACCAGGGCTCGTTCCTGGGCCGAATAAGCATTCGAAGAAACCAAGTCATGTCAATGGACGGAAGCCACGACCAAGAGCTAGAAGACCTCGAGCTTTTCCAAAAGCACGTCAGCGACAGATTCACCGATCTCTTATCATCCACCACCGACGACCCCTCCGCCGACGCCCTCCTCTCAATTTCCTGGCTCCGTAAACTCCTCGACGAGTTCCTCTGCTGCGAAGCCGAATTCAAAGCCGTTGTCATGATGGGTCGCGACCCCAGCCAGATCGTCAAACCCCCACTCGACAAACTCCTCCCTGAATTCCTCGACCGCGTCGTCAAATCCCTCGACGTTTGCAATGCCGTCACACTAGGCCTCGACGCCGTCAAGAACCTCCAACGCCTCGCCGAGATCGCCGTCGCCGCCCTCGAACAAATCCCCATCGGCGACGGCCAGGTTCGCCGCGCCAAGAAGGCGCTTAACTCCCTCATCACGGCCATGACGCAAGAGGACGGCACCAAGGGAACCGAGAGAAGCAGGTCATTCGGCAGAAGAAACAACAACAATAACAACAACAACAACAGCAGTACCAACCGTGGCGGTTTCCGGTCACTGTCTTGGACCATGGCGCGGAACTGGTCCTCGGCGAAACAAATCCACGCCATGTCGTCCAATCTGGCTGCGCCACGTGGCGCAGAGGCCTCTGGACTGGCGTTGCCCGTTTACATAATGAGCACTGTTTTGGTGTTTGTTATGTGGACTCTTGTTGCGGCTGTTCCGTGTCAAGAGAGGAATGGGCTTGCCACTCATCTTGCGTTTCCCAGGCAATTGGGCTGGGCCCAGCCCATGATTGGGTTGCAGGAGAAGATTGCGGAGGAGTGGAAGAAGAAGGAGAAGAAAGGGTCGGTTGGGTTGTTGGAAGAGATGCAGAGGATGGAGAAGCTGGGGCAGTCTCTTGTTGATTTCGCTGAGTCGTTTCAGTACCCGGCTGAAACGGAGCGTTTGGATGAGGTGAAAGCACAGGTTGAGGAGTTGGGAGAGATTTGCAAAAAGATGGAGGAAGGGTTGGAACCTTTGCAGCAGCAAATTAGGGAAGTGTTTCACAGGGTTGTAAGGAGCAGGACTGAGTTTCTTGTTGTTTTGGACCAAGCTGGGAAATTGTCCACTCCTCCTTTGTAA 1182 0.544 MPATTENNQGSFLGRISIRRNQVMSMDGSHDQELEDLELFQKHVSDRFTDLLSSTTDDPSADALLSISWLRKLLDEFLCCEAEFKAVVMMGRDPSQIVKPPLDKLLPEFLDRVVKSLDVCNAVTLGLDAVKNLQRLAEIAVAALEQIPIGDGQVRRAKKALNSLITAMTQEDGTKGTERSRSFGRRNNNNNNNNNSSTNRGGFRSLSWTMARNWSSAKQIHAMSSNLAAPRGAEASGLALPVYIMSTVLVFVMWTLVAAVPCQERNGLATHLAFPRQLGWAQPMIGLQEKIAEEWKKKEKKGSVGLLEEMQRMEKLGQSLVDFAESFQYPAETERLDEVKAQVEELGEICKKMEEGLEPLQQQIREVFHRVVRSRTEFLVVLDQAGKLSTPPL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1231 393 Pfam Protein ROH1-like 6 381 IPR008511 -
Apr2g1231 393 PANTHER OS02G0109200 PROTEIN 1 388 - -
Apr2g1231 393 Coils Coil 336 356 - -
Apr2g1231 393 MobiDBLite consensus disorder prediction 170 202 - -
Apr2g1231 393 MobiDBLite consensus disorder prediction 183 202 - -
Apr2g1231 393 PANTHER BPS1-LIKE PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1231 Apr-Chr2 18557797 18559337 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1231 - - gmx:100817717 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1231 2 18557797 18559337 Apr2g1231 2 18557797 18559337 ECH