Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1213 ATGGCACGGTTGGTCATGCCATCGAAGACATTGGCCTTTTCGAGGAACTCTCTACTGGGTTTGATCGCACCTGCTCCTGGGAATTGCTGCGTAAATTATTTTCAGAATACAGCGAACAGGAGCCTCAGATTGAGGCATTTCCTTGCATCAGAGGTCAATTTCCGAAAGAAGTGTTGGCCCCTTTATTCTTCACTACCAAGGGTCAAGCAAGTAAGTCGGAGGCTAATTTGTTCGGTTGCCACAGAGGATTTACCGAAGCAAGTTGAAGAATCTAAAATGGAGACACCAAGAGAAATATTCTTAAAGGATTACAAAATGCCTGATTACTACTTTGACACTGTGGATCTGAAATTTTCCTTGGGCGAGGAGAAGACTTTAGTTAGTTCTAAAATTGCTGTGTATCCTCGCATTGAAGCAGGTTCTTCTCCCCCACTAGTTTTAGATGGACAGGACTTGACTTTAGTTTCAATTCAAATTAATGGGAGGGCTTTGAAGGAGGAAGATTATCATTTGGATGCACGCCACCTCACAATCCTATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTTACGGAGATTTACCCACAGAAAAACACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTATCAGGATCGACCCGATATAATGGCCAAATATACAGTTCGCATTGAAGCAGATAGATCACTGTATCCAGTGTTATTGTCTAATGGAAATCTAGCTGAACAAGGTGTCTTGGAGGATGGCAGGCACTATGCAGTTTGGGAGGACCCCTTCAAGAAACCTTGTTATCTGTTTGCCTTGGTTGCTGGGCAATTGCAGAGCAGGGATGACACATTTATTACCCGTTCTGGGCAGAAGGTGTCCCTTAGGATCTGGACACCTGCAGATGATGTACCTAAGACTGCACATGCTATGAATGCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAACATTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAAAACAAAAGCTTGAATATTTTCAATTCTAAGTTGGTATTGGCTTCTCCAGAAACTGCATCTGATGGAGATTATGCTGCTATATTGGGAGTTATTGGTCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGTGACTGGTTCCAGCTTAGCCTTAAGGAAGGTCTCACTGTTTTCCGTGATCAGGAATTTTCATCTGACTTGGGAAGTCGTACTGTAAAGCGAATTGCTGATGTTTCAAAACTTAGAAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCGCATTCTTACATCAAGATGGACAACTTCTACACAGTTACGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTACTGGGAAGTCAAGGGTTCCGAAAAGGCATGGATCTTTATTTTAAGAGACACGATGGTCAAGCTGTAACATGTGAAGATTTTTTTGCTGCCATGCGAGATGCAAATGATGCAGATTTTGCAAATTTCTTACAATGGTATTCTCAAGCTGGGACTCCTGTTGTCAAAGTAAATACCTCATATAATCCAGAAGCACATACTTTTTCATTAAAGATTAGTCAAGAGACACCACCAACTCCAGGGCAACCAGTTAAAGAACCCGTGTTCATTCCTGTTGCAGTGGGTTTGCTCGGTTCCAATGGCAAGGACATTCCTCTTAGAAGTGTTTATCATAATGGGATTTTGCAATCTATTTCAAGCAATGATCAATTAGTCTTCACTACAGTCCTTAGAGTGACCAAGAAAGAGGAAGAGTTTATATTTACTGATATATCTGAGAGGCCCGTTCCATCTTTGTTAAGGGGATACAGTGCTCCTATCCGTCTGGAATCTGATCTCACTAATAGTGAACTGTTTTTCCTGCTAGCTAATGATTCTGATGAATTCAACCGTTGGGAAGCTGGACAAGTTTTGGCACGGAAGTTGATGCTCAACTTAGTGGATGATTTGCAACATAACAAACCATTGGTTCTGAATCCCAATTTTGTTGATGGGTTCAAACGTATACTATGCGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCGATAACCCTGCCTGGTGAAGGAGAAATAATGGACATGATGAAAGTTGCAGATCCTGATGCTGTTCATGCTGTTCGAATTTTCATCAGGAAGCAGCTTGCAAGTGAACTGAGATCAGAGTTCCTCAGAACAGTAGAAAATAATAGGAGCTCAGAAGAATATGTTTTCAATCACCCAAACATGGCCAGGCGTGCTCTGAAGAATGTTGCCCTTGCTTATCTTGCATGCCTTGAGGAGCAAGAATTCACTGAACTTGCGCTGCATGAGTATAAAACTGCTACAAATATGACTGAGCAATTTGCTGCTTTGGCTGCCATATCCCAGAACCCTGGAAAAACCCGTGATGATGTTCTTGCTGACTTTTATGGCAAATGGCAGCATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTTCAAGCAATGTCTGATGCTCCCGGTAATGTTGAGAATGTGCGGAAACTGTTAAACCACCCAGCATTTGACCTGCGCAATCCCAACAAAGTGTATTCTCTCATTGGAGGTTTCTGTGGGTCTCCGGTGAACTTTCATGCAAAGGATGGATCAGGCTACGAGTTCCTTGGAGAAATTGTGCTTCAACTTGACAAGCTAAATCCTCAGGTTGCCTCGAGAATGGTGTCAGCCTTCTCAAGATGGAGGCGTTACGATGAATACAGACAAAAACTGGCCAAGGCCCAGCTGGAGAAGATCATGTCTTCTAATGGACTATCGGAGAATGTGTTTGAGATAGCTTCGAAGAGCTTGGCTGCTTAA 2943 0.4268 MARLVMPSKTLAFSRNSLLGLIAPAPGNCCVNYFQNTANRSLRLRHFLASEVNFRKKCWPLYSSLPRVKQVSRRLICSVATEDLPKQVEESKMETPREIFLKDYKMPDYYFDTVDLKFSLGEEKTLVSSKIAVYPRIEAGSSPPLVLDGQDLTLVSIQINGRALKEEDYHLDARHLTILSPPSGKYDLEIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADRSLYPVLLSNGNLAEQGVLEDGRHYAVWEDPFKKPCYLFALVAGQLQSRDDTFITRSGQKVSLRIWTPADDVPKTAHAMNALKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDGDYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLQWYSQAGTPVVKVNTSYNPEAHTFSLKISQETPPTPGQPVKEPVFIPVAVGLLGSNGKDIPLRSVYHNGILQSISSNDQLVFTTVLRVTKKEEEFIFTDISERPVPSLLRGYSAPIRLESDLTNSELFFLLANDSDEFNRWEAGQVLARKLMLNLVDDLQHNKPLVLNPNFVDGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMKVADPDAVHAVRIFIRKQLASELRSEFLRTVENNRSSEEYVFNHPNMARRALKNVALAYLACLEEQEFTELALHEYKTATNMTEQFAALAAISQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDAPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYEFLGEIVLQLDKLNPQVASRMVSAFSRWRRYDEYRQKLAKAQLEKIMSSNGLSENVFEIASKSLAA* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1213 980 Gene3D tricorn interacting facor f3 domain 106 290 IPR042097 -
Apr2g1213 980 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 547 - -
Apr2g1213 980 Gene3D - 291 375 - -
Apr2g1213 980 Gene3D - 655 979 IPR037144 -
Apr2g1213 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 272 287 IPR001930 GO:0006508
Apr2g1213 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 354 364 IPR001930 GO:0006508
Apr2g1213 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 390 405 IPR001930 GO:0006508
Apr2g1213 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 409 421 IPR001930 GO:0006508
Apr2g1213 980 Pfam Domain of unknown function (DUF3458) Ig-like fold 540 653 IPR035414 -
Apr2g1213 980 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 96 288 IPR042097 -
Apr2g1213 980 Gene3D - 540 653 IPR038438 -
Apr2g1213 980 CDD M1_APN 103 537 - -
Apr2g1213 980 Gene3D Neutral Protease Domain 2 376 539 IPR027268 -
Apr2g1213 980 PANTHER BNAC06G01820D PROTEIN 54 474 - -
Apr2g1213 980 PANTHER BNAC06G01820D PROTEIN 475 980 - -
Apr2g1213 980 Pfam Domain of unknown function (DUF3458_C) ARM repeats 658 979 IPR024601 -
Apr2g1213 980 PANTHER - 54 474 IPR012779 GO:0008270
Apr2g1213 980 PANTHER - 475 980 IPR012779 GO:0008270
Apr2g1213 980 TIGRFAM pepN_proteo: aminopeptidase N 103 978 IPR012779 GO:0008270
Apr2g1213 980 Pfam Peptidase M1 N-terminal domain 114 282 IPR045357 -
Apr2g1213 980 Pfam Peptidase family M1 domain 322 534 IPR014782 GO:0008237|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1213 Apr-Chr2 18314836 18324413 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1213 K01256 - gmx:100803548 1805.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1213 2 18314836 18324413 Apr2g1213 2 18314836 18324413 ECH