Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1211 ATGCCACCATTCGCAGGCTCTTTCCCCCAACTACAACCAAAGCCAGATTCCAATGTAGTCTCCATCGACGTGGGTGGCCAAGTGTTCCAAACAACGAAACAAACATTAACCTCCGCAGGTCCTAAAACATTCTTCTCAAAGATCGTGGAAGCATCGCTGCTATGCACACCCTTCATAGACAGAGACCCTGAAATGTTCTCTCTCTTGCTCTCGCTCCTCAGAACCGGCAACCTTCCATCAAAAGCCAAAACCGTCGATCTCCAAGATCTAATCTTAGAGTCCCAATTCTACGGCATAGAGAACCTTCTCATCAATTCCTTCTCCAACCCTTCTCAATTGGAACCCTTCAACCTCCAAAAATCTCTCCTTTTGCCCTTAAACGGAAGAGACTCGCCCTCCACCCTCGCCACCACCCCCTACGGCTCCCTTCACGTCGCACACGGCAGCAAAATCACCTCCTTCGACTGGTCCCTCCGCCGTAAATCGACTATCCTCACCCACTTTACCGCCGTCGATTCCCTCTTAGCCATCTCGCCGGAGATCGCCGCCGCCGGCGCAAACGATTTCTCCGGCCTCCAGATTCTGGATTTGGAAAAGGGGCGCGTCAGGGAAACCCTAAATTGGGAAAACGTGACCAAATCGGGCTCCACCGTCCAAGCCATCGGATCCTCGCCGGATCAAATGTTCGTGAGCTTCGAGTCTTGCCGGAGAAACTCGAATTCCATATTGGTCTACGATTTGCACACGCTTAGCCCCGTGACAGAAATCGGGCACAACGAAATCTTCGGCGCCAACATCGATTCGGCGATTCCGGCGACGAAGCTGCAGTGGGTCGAAGGTTACAACTTGTTGATGGCTTCTGGGTCCCACAGTGGTCCTTCTGGTGTTTCCGGTAACATTAGGTTATGGGATGTTCGGTCCGGTAACGTGGTTTGGGAGATGTCGGAGAAGGTGGATTGTTTTGCTGACGTGGCGGTTTCTGATGCGTTATCGGTTATTTTCAAGGTTGGAGTCAATTCGGGAGAAGCGTTCTACGTGGATTTGCGGAACCTAAGCAATGAGAACACGTGGGTGTGTCTTGGAGATAAGAGGAAAGTGATGAATGGAAAGAAGGAAGGGTTTGGTTGCAAGATTGAAACGCAAGGAAATCAAGTGTTTTGTACAAAGGGTGGAGATGTGGAGTTATGGTCAGAAGTTGTAATGGGAAATGTTAACAAAGGTTTGGAAGAGAGGATCTTCAAGAAGAACTTGATGGGGAGGGTAAGGGATGTGGGTGGTGCTAAAATCACCAACTTCTCCTTTGGTGGTAGTAGGATGTTCTTGACTAGGAAGGATCAAGAATGTGTTGAGGTGTGGCAGAGTTCGTCTAGGGAACTTTGA 1380 0.4993 MPPFAGSFPQLQPKPDSNVVSIDVGGQVFQTTKQTLTSAGPKTFFSKIVEASLLCTPFIDRDPEMFSLLLSLLRTGNLPSKAKTVDLQDLILESQFYGIENLLINSFSNPSQLEPFNLQKSLLLPLNGRDSPSTLATTPYGSLHVAHGSKITSFDWSLRRKSTILTHFTAVDSLLAISPEIAAAGANDFSGLQILDLEKGRVRETLNWENVTKSGSTVQAIGSSPDQMFVSFESCRRNSNSILVYDLHTLSPVTEIGHNEIFGANIDSAIPATKLQWVEGYNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEMSEKVDCFADVAVSDALSVIFKVGVNSGEAFYVDLRNLSNENTWVCLGDKRKVMNGKKEGFGCKIETQGNQVFCTKGGDVELWSEVVMGNVNKGLEERIFKKNLMGRVRDVGGAKITNFSFGGSRMFLTRKDQECVEVWQSSSREL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1211 459 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Apr2g1211 459 SUPERFAMILY POZ domain 17 105 IPR011333 -
Apr2g1211 459 Gene3D Potassium Channel Kv1.1; Chain A 10 115 IPR011333 -
Apr2g1211 459 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 14 457 IPR045068 -
Apr2g1211 459 Gene3D - 144 459 IPR015943 GO:0005515
Apr2g1211 459 SMART BTB_4 18 114 IPR000210 GO:0005515
Apr2g1211 459 CDD BTB_POZ_KCTD-like 20 97 - -
Apr2g1211 459 PANTHER PROTEIN BINDING PROTEIN 14 457 - -
Apr2g1211 459 SUPERFAMILY WD40 repeat-like 122 351 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1211 Apr-Chr2 18297668 18299742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1211 - - gmx:100792189 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1211 2 18297668 18299742 Apr2g1211 2 18297668 18299742 ECH