Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1199 ATGTCTGGATGCAATAAATTACCTAAAAATGATCAACAGTCAATCAAACGTAGGCGGATTCAACGTGGAGGGGCATCCTTTGAGACTGATCTTTCTTGTGTTGATTATTCGCCTCCCCTATCCAACAATGAGAATAAGCAATGCTACAGACAGAAGTCTCCTCCGATACTGAGCACAGCTCAGCTCATCTCTGCAATAGACCAGATATGGGATTCTGCAAGTCGCCCTCTTTCATTTTTACTCTCAAAGAAAAATGTGAATCAGAACGATAAAGGGTTCCTTGAAGATAAGATTCTGGATGGCATTGATGAGAAAAAGAATGGCCTGGTCTATACTTCAAATAACACTAATTACTATTCTGTTTCTGGGAGTGGTTCGCAGATTGTACAGGAAAAGTTGGATTTCCCCAAGGCTAGGGATAGAAATTCAAATAAAGATTGGAAAGAAGTGGAACTTGGGAGGGAGGAAATGTCATATAGATTAGGAAATGTATATTGGTGGGTTAGTAGGAATGGTCCAAAGACACTAAACAATCATGTGAATGTTACCCTGCCTGAGAACCTTGAAATTAATTATCCCATTGCTAAGGGTGGCATTTCAATAGATACAAGCACCCCTGCATTGGCTAATGAGAGTGATGTGTGCAGTCCTGATTTAATCACGCATGAAACTCAATCATTGTCTAATGATGCAATCCTGAACACAAGAAAAGCTAGCCCTCTGTGTTCAGACTATTTTCTTCAAGCTGTGCCTGATACTAAGGCAGATGTCAGTGCTTGTCAGACCCTTTCTTCTAGTATCTGTACAGATTATCATATTAACTCTTTAGCTACCTGTAGTACTGTTTCTGTACAAGGCCAACATGAGATTGATGATAACAAATCACTGGAAATTCAAAGCAGACATTTCTCAGATATAACTAATGATGATCAGAAGCCTCATTATTCCCAAGCAAAGCAAGAACACGCTTTTTCTGGGGCATTGGCTGGTGTATGTGTCAGCCTTTGTTTGCATCCCGTTGACACAATTAAGACAGTTATTCAATCTTGCCGTGCAGAACACAGGTCCATCTTTTACACTGGCAAATCAATTGTTTCTGATAGAGGTTTGCTTGGACTATATCGTGGTATTACCACAAACATTGCGTGTTCAGCTCCAATTTCTGCAGTTTATACTTTCACCTATGAATCCGTTAAAGCAGCTTTGCTTCCCTATCTTCCAAAGGAGTATCATTCTTTTGCCCATTGCGTGGGAGGTGGTTGCGCAAGCGTTGCCACCTCTTTCATTTTTACTCCCAGTGAGCGAATAAAGCAGCAAATGCAAGTTGGGTCTCAGTATCGCAACTGCTGGGATTTATTGGTTGGAATTATCAGAAACGGTGGTTTTTGCTCCCTATACACAGGTTGGGGAGCTGTACTGTGTCGGAATGTTCCACATTCAATTATCAAGTTTTATGCATATGAAAGCTTGAAGCAAGTGATGCCATGTAGTATTCAACCCAACACGTTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTAATCAAGACTAGATTACAGACACAGATTCCTGGATCTGCAAATCAATATGATAGTGTTCTCCATGCCCTTTACAAAATTAGTAAGAGTGAAGGCTTGAAGGGCCTTTACAGGGGGTTGACTCCACGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCTTCATATGAATTTTTCAAGAGGGTCTTTTCTCTGGAAGCATCGCATCCCACTGATTTATGCATTCAGAACGAATGCATGAATGTTGAAGACAGAAAGAACTTAGAATTAACAGGTCCATCGTAG 1863 0.4069 MSGCNKLPKNDQQSIKRRRIQRGGASFETDLSCVDYSPPLSNNENKQCYRQKSPPILSTAQLISAIDQIWDSASRPLSFLLSKKNVNQNDKGFLEDKILDGIDEKKNGLVYTSNNTNYYSVSGSGSQIVQEKLDFPKARDRNSNKDWKEVELGREEMSYRLGNVYWWVSRNGPKTLNNHVNVTLPENLEINYPIAKGGISIDTSTPALANESDVCSPDLITHETQSLSNDAILNTRKASPLCSDYFLQAVPDTKADVSACQTLSSSICTDYHINSLATCSTVSVQGQHEIDDNKSLEIQSRHFSDITNDDQKPHYSQAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEHRSIFYTGKSIVSDRGLLGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLPKEYHSFAHCVGGGCASVATSFIFTPSERIKQQMQVGSQYRNCWDLLVGIIRNGGFCSLYTGWGAVLCRNVPHSIIKFYAYESLKQVMPCSIQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRVFSLEASHPTDLCIQNECMNVEDRKNLELTGPS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1199 620 ProSiteProfiles Solute carrier (Solcar) repeat profile. 500 588 IPR018108 -
Apr2g1199 620 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 401 IPR018108 -
Apr2g1199 620 Gene3D Mitochondrial carrier domain 296 409 IPR023395 -
Apr2g1199 620 Gene3D Mitochondrial carrier domain 410 608 IPR023395 -
Apr2g1199 620 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 602 - -
Apr2g1199 620 Pfam Mitochondrial carrier protein 501 590 IPR018108 -
Apr2g1199 620 Pfam Mitochondrial carrier protein 410 494 IPR018108 -
Apr2g1199 620 Pfam Mitochondrial carrier protein 321 402 IPR018108 -
Apr2g1199 620 SUPERFAMILY Mitochondrial carrier 321 585 IPR023395 -
Apr2g1199 620 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 602 - -
Apr2g1199 620 MobiDBLite consensus disorder prediction 1 21 - -
Apr2g1199 620 ProSiteProfiles Solute carrier (Solcar) repeat profile. 410 493 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1199 Apr-Chr2 18186834 18191214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1199 323 589 EF-hand Containing Proteins AT2G35800 28.625 6.71e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1199 - - gmx:100812271 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1199 2 18186834 18191214 Apr2g1199 2 18186834 18191214 ECH