Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1186 ATGGAAGAAGAGAGCCAAACAACAAAAGGAAAATATGCTGCGAATATTTCCTCCATAAAAGAAGCGCATGCCCGAATAAAATCTATGGTTCTTAAAACTCCAGTTCTGTCCTCCAGCTCTCTGAATGCTATATCAGGAAGGCAGCTCTACTTTAAATGTGAATGTTTCCAAAAGGGTGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCTGTCTTCTCTCTTAATGATGAAGATGCTTCCAAAGGGGTTGTAACACACAGCAGTGGAAACCATGCTGCAGCATTGGCCTTGGCAGCAAAACTTAGAGGGATCCCTGCATATATTGTTATTCCAAAAAATGCACCAGCCTGCAAAATTGAGAATGTAAAGCGGTATGGGGGTCAAGTTATTTGGTCTGAGACCTCTATTCAATCGAGGGAAGAAATTGCAAACAAAGTGTGGCAAGAAACTGGTGCTATCTTTGTACATCCGTATAATGATGGGCGCATATTGAGTGGCCAGGGTACCATATCCTTGGAGCTTTTGGAACAAGCCCCAAAAATAGATACACTAGTGGTACCCATAAGTGGTGGTGGTTTGATATCAGGAGTAGCACTGGCTGCCAAGTCCATCAACCCAGCTATTCGGATTTTTGCTGCTGAACCTAAAGGAGCGGATGATGCAGCACAATCTAAAGCAGCTGGGAGGATAATCACATTGCCTGAGACCAATACCATAGCTGATGGACTTCGAGCATTTCTTGGAGATTTCACATGGCCTGTAGTAAGAGATCTTGTTGAGGACATTATAACTGTGGAAGACAGTGAAATAATAAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTATTCTATCCGATACTTTCCAGAAAAATCCTGCTTGGAAGGATTGCAACCATATAGGAATAGTTGTTTCAGGAGGCAATGTTGATCTCGCCATGCTTTGGGATTCTTTGAACAAATGA 1002 0.4232 MEEESQTTKGKYAANISSIKEAHARIKSMVLKTPVLSSSSLNAISGRQLYFKCECFQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLRGIPAYIVIPKNAPACKIENVKRYGGQVIWSETSIQSREEIANKVWQETGAIFVHPYNDGRILSGQGTISLELLEQAPKIDTLVVPISGGGLISGVALAAKSINPAIRIFAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAILSDTFQKNPAWKDCNHIGIVVSGGNVDLAMLWDSLNK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1186 333 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Apr2g1186 333 Gene3D - 62 158 IPR036052 -
Apr2g1186 333 PANTHER - 30 333 - -
Apr2g1186 333 PANTHER - 3 42 - -
Apr2g1186 333 Gene3D - 25 323 IPR036052 -
Apr2g1186 333 CDD Thr-dehyd 16 323 - -
Apr2g1186 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 30 333 - -
Apr2g1186 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 3 42 - -
Apr2g1186 333 Pfam Pyridoxal-phosphate dependent enzyme 30 303 IPR001926 -
Apr2g1186 333 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1186 K12235 - gmx:100799758 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1186 2 18093512 18096503 Apr2g1186 2 18093512 18096503 ECH