Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1184 ATGATGGAGGAACCTCCAATTTCAGTTTCAGAAACAGCATCACCATCATCATCATGCTGGAGCAACGTCGTGAAGAAGCAACCACCTCCTCAAGAGCCCCTTCACGCCGACCGAGTCTTGGAGGAGACCTGCAAATCCACCAATTCTATCTCACTCGCCGTCGTCGATGCCAACGCCGTCATTGAATCCGGCGAAAAGCTTCACGGCCTCGCTGACAAGTTCGTCTCCGTCCATGAAGTCATGGAAGAAATCCGCGACCCTGTTTCGCGCCACAAACTCTCCTTCCTTCCATTCTCTATACAAACCATGGAACCCTCTCCTGAATCCATCAACAAAGTTATCAAATTTGCTAGGGCTACTGGTGACCTACAAACTCTTTCTGATGTTGATATCAAGCTCATTGCTTTGACTTATACATTGGAGGCTCAGATTCATGGAACGAAACATCTCAGGGACACCCCACCTCCTGTGCAAATGCTAAATGTGAAGAGGTTGCCTGAGAAGGACATGCCAGGATGGGGTAACAATGTGCCTAATTTGCAGGAGTGGGAAGCGTTAGAACACGAAATTGAGGGGAATTCCAATTCCAGGATTCTTCCTCTGCAGGACTTGAACTTGAACATTGTTTCTCAAGATGACAATTCCGTTGATGGTTCTGTGGAGCGGGAGAGTGAAACTCCTTTGGGAATTCAAGAGGGTGGTGAGCGTGGTTCGACGAAGCCTAGGAGATATCTGCCTAAGAAAAAGGAGATAAACATTGAAGGGAAGACGATGGTGGCTGATGGAATTGATGCATCTCAAGGACAGGTTGATGACGCTGCTGGTGATTGGATGCCTGCTGTTAGTCGAAGTACTCATAGGAGGTATCTAAGAAGGAAAGCTAGACGTGAGTACTATGAGTCATTATCTAGTAATCAAGATCAGCAGGATTTGGGAGAAAACATTGATGATAGTGTTGGTGAAGATGCTAGAGCTTCAGATGAGCTTGTTCATCAAAGGGATGAAGGAAAGGATGTTGAAAATATTGTTTTAGAGGATGATCAGATGACAGAAGGGAACAAAGATAATGAATGTCTCTCTGCAGTTTTGAAGCAAATGAGGCTGGAAGAAGGTTCACCTGAGGTTCTAGACGAAGAACAGAGACTAAGTTTGTCTCCTGAAGAACTCCAGGCAAACAATGCTAGTTTGCTGGAAACTGCATCTGATTGCAATGCAACTATGGCCACTAAGCCATGTGATGAAGATACAGTCAATAACCAATTGAATCACTCGGAGATTGCAAGCCAGGCTAGTGAACCTACTGATTTTTCGTACGCAGACGAGGATGGCAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCTGAATCAAGTGTAGCCTGTGTAACGGGTGACTTTGCAATGCAAAATGTTCTCCTCCAAATGGGTTTGCGCTTGCTGGCACCTGGAGGAACGCAAATACACCAACTGCACAGATGGATACTCAAGTGTCATGCCTGTTATACTGTTACTGCTGAAATTGGGAGGATTTTCTGCCCTAAATGTGGAAATGGTGGCACCTTAAGGAAGGTCGCCGTCACTGTTAATGAAAATGGTATAGTATTAGCAGCCCGTCGACCACGAGTTACATTACGTGGCACAAAGTTTTCATTGCCTTTACCCCAAAGTGGAAGGGATGCAGTCACAAAGAACCTCATTCTCCGTGAAGATCAACTTCCTCAAAGGGTACTTTACCCTAAAACAAAGAAGAAATCCAACAAGCAGGATGATGACTTCTTTACACCAGATCATGTATTTTGCCACCACACAGATAAGAAAGCTCCTTTCCAGCCTCCTATAAGGAAAGCATTGGCGGTGTTCAGTGGGAAGAGAAATCCAAATGACAATCACTTCTCACGCTCAAAGCATAAGTAG 1911 0.4516 MMEEPPISVSETASPSSSCWSNVVKKQPPPQEPLHADRVLEETCKSTNSISLAVVDANAVIESGEKLHGLADKFVSVHEVMEEIRDPVSRHKLSFLPFSIQTMEPSPESINKVIKFARATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDTPPPVQMLNVKRLPEKDMPGWGNNVPNLQEWEALEHEIEGNSNSRILPLQDLNLNIVSQDDNSVDGSVERESETPLGIQEGGERGSTKPRRYLPKKKEINIEGKTMVADGIDASQGQVDDAAGDWMPAVSRSTHRRYLRRKARREYYESLSSNQDQQDLGENIDDSVGEDARASDELVHQRDEGKDVENIVLEDDQMTEGNKDNECLSAVLKQMRLEEGSPEVLDEEQRLSLSPEELQANNASLLETASDCNATMATKPCDEDTVNNQLNHSEIASQASEPTDFSYADEDGSEQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGTQIHQLHRWILKCHACYTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIVLAARRPRVTLRGTKFSLPLPQSGRDAVTKNLILREDQLPQRVLYPKTKKKSNKQDDDFFTPDHVFCHHTDKKAPFQPPIRKALAVFSGKRNPNDNHFSRSKHK* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1184 636 MobiDBLite consensus disorder prediction 1 35 - -
Apr2g1184 636 Pfam Nin one binding (NOB1) Zn-ribbon like 486 556 IPR014881 -
Apr2g1184 636 Pfam PIN domain of ribonuclease 54 140 IPR033411 -
Apr2g1184 636 SUPERFAMILY NOB1 zinc finger-like 486 549 IPR036283 -
Apr2g1184 636 PANTHER RNA-BINDING PROTEIN NOB1 38 635 IPR039907 -
Apr2g1184 636 PANTHER - 38 635 - -
Apr2g1184 636 MobiDBLite consensus disorder prediction 214 242 - -
Apr2g1184 636 MobiDBLite consensus disorder prediction 317 334 - -
Apr2g1184 636 Gene3D - 43 155 - -
Apr2g1184 636 MobiDBLite consensus disorder prediction 300 334 - -
Apr2g1184 636 CDD PIN_Nob1-like 54 165 IPR033411 -
Apr2g1184 636 MobiDBLite consensus disorder prediction 9 25 - -
Apr2g1184 636 Gene3D - 480 554 IPR036283 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1184 K11883 - gmx:100785714 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1184 2 18085895 18089527 Apr2g1184 2 18085895 18089527 ECH