Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr2g1180 | ATGTTCAGATGGAGGAGTGAGAGAAACAAGGTCAAAGCTGTTTTCAAACTCCAATTCTATGTCACCCAGATAGTGCAATCTGGGGTGGATGCTTTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCTGCAATTTGTGGTGGAGTTTGTAGATGGGAGAGTCCTGTATATGAAACAGTGAAGTTTGTTCAGGAGCCTAAGACTGGGAAATTCAGTGAGAGAAAATATCATTTTGTGGTTTCTACGGGATTGTCAAAAGCTAACTCCTTTGGGGAAGTTTCTATAGACTTTGCTGAGTATGCTGAGGCTACAAAGCTCTCTACTGTTTCTCTTCCCATCAAGAATTCTCATTGTGATGCCGTTTTGCATGTATCAATTCATAGACTACAAGAAAATAATGATAAAAGAGAGGAAGAGCAATGTGAAGACGACAAATTAAAGTCCCATGATAGAAGTTTGAGGACCTATTTAAGCAATGGAGATATAGATGCAAGCACTAAAAGTGATTCTTCTGAAGATGTTTCTGCCAAAGTAAAAACCAATGGAGCAGAATTGAATACTGATTGTAGGACATCTAGTGGATCTGACATTACATTGTCAAGTTCTGATGGCAGCTCTGGACTTGATACTCCCCGGGAACTTGGACTAAATGGTAGCATCCACCCCAACAACAATGGTTTTCTATCGGATGTGAGCCACACTTCTGAGCCTCAAAAACCTGCTGTAGATGCCTCAGCGTCAATATATGATGTACATCAGAGATCACCCTGGGACTGGTCAGCTGGTTCAGAACATGGTTTGAGTACGGATGGTTCAGCAAATGGTTCTCAGGATGCCCTCCCTAGGGAAAGATCCAATCAAACATCAGATATGGAGATTGAAAGACTCAAAGCTGAAGTTGCTGCTTTGGCCAGGCAGGTGGATGTATCAGACTTGGAACTACAAACTCTAAGGAAGCAAATCATAAAGGAAAGCAAACGAGGGCAGGACCTCTCAAAGGAAATTGTTAGCTTGAAAGAGGAAAGAGATACGCTCAAGATTGAATGTGAGAATCTCCGGTCTTTTCACAAACGAATGGAGGAGGCCAAAGCTAGAAATAGGTCACACTTGGAAAGTGGTGATCTTCGTACTCTTGTGGAAGAAATTAGACAAGAATTGAAGTACGAGAAGGACCTGAATGCAAATCTCCAATTACAGCTAAAGAAGACACAAGAATCAAACGCTGAACTAGTTCTTGCTGTCCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGAGAAATATGTGGTCTTTCCAATAAGAATGAAGAGAGTAAAAAATCCCGCGAGTTAGGGAGAAACCTCTCTAATTGTGAAACAGACGACGATGAAGAACAGAAAGAATTGGAAGAGCTTGTTAAGGAGCACAGCAATGCCAAGGACACATATTTACTTGAGCAAAAAATTATAGATCTCTATGGTGAAATAGAAATGTATAGGAGGGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTGGACTATGAGATATTGAAACAGGAAAACCATGACATTGCATATAAGCTTGAACAAAGCCAACTGCAAGAACAGTTAAAATTGCAGTATGAGTGCTCTTCTCCTCCTGCGGTTGATGACCTTGAAACTCATATTCGGAGTCTGGAAAATCAACTCAAGGAACAATCGGAAGAATTCTCAAATTCTCTGGCTACCACCAAGGCACTTGAAACTGAAATCAGCAGATTAGAGGAGGAAATGGAGAAACAAGCACAAGGATTTGAAGCTGATCTGGATGCTGTGACACGTGACAAAATTGAGCAGGAGCAAAGAGCCATCCGTGCAGAGGAAGCTTTGAGAAATACCAGAGTTAAAAATGCCAATACTGCAGAGAGGCTTCAAGAAGAATTTAGAAGGCTCTCGATGCAAATGGCCTCAACATTTGATGCAAATGAGAAGGCTACCATGAGGGCATTAACAGAAGCAAGTGAACTTCGGGTGCAGAAAAGACTATGTGAAGAAATGCTGCACAAAGTCAAAGATGAGCTTCGGTCAGTCAAAGCTGATTATGAGGTAAAACTTACTGAAATTTCCAACAAAATAGACATGATGAGTGCTCAGAAACAACAGATATTGTTGGAAATTGAGGACAAGTCCAAACAGCTTGAAAATCAGAAAAAGCATGAGGAACAAGTTAGTAGGGATTTCTCTGAAGAGATTCAGATGCTAAAAGCTGAGAATGAAAAGCTTAAAGTGGATATTTCATGCTTCTCTGAGCAACTTGAACAAAAAGAAATCTTAAGAAATGACTTGAAACTTACGAAGAAATCACTTGAGGAATCGGAGAATTGTTTACATAATAGAATGGTGGAAAGAAATGAGCTGGTGAGTACAATTGCTTTATTGAAGAAGGAAGCAGAAAGGTCACTCAATGAGCTAAATAGGATGAAGCATCTCAAGGATGAAGAAGAGACAGCAGGTAGACTCTTGCATTTGGAGTTAGAAGCACTTAGAGCTCAATATAGTGACTTAAAATGTTCTCTTACTGAGGATGAGACTGAGAAAGAAAGACTAAGAAAGCAAGTTTCCCAGCTAAATGGCGAACTCAGGAAGAAGGATGAAGCATTGATCAACATTGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAACTTTCTGATGGAACTAAAACCAATTTGACGAACAAGAAAGGTGTTTCAATTCCTCAGAATTCAAAAGAAATGTCAAATCTGAGAGAGAAAATAAAAATGCTTGAGGGCCTGATAAAGTCAAAGGAAACTGCCTTGGAAACATCAACTTCCTCATTTTCAGAGAAGGAAAGGGAACTCCAATCCAAAATTGAGGAACTGGAGAACAAAGTGGAGGAATTCAATCAGAGCATTGCCTTGCAAAAGGTTGAGAATCTCAATGATACTACACACATGTCCCAAGAAAATGGTGCTGCAGTGTCATTGTTCAAGAGTGATGTATATTCGTTGGAGAAAGAAGCCGAAATATCCACTAAGGATGACAACCTTTGTGACATTTTGACTGAACTATCCATGTTGAAGGAAAAAAATAACTCAATGGAAACCGAACTGAAAGAGATACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTGAGAAACCTCAAGAATAACCGGAGGGGCCAATGA | 3243 | 0.403 | MFRWRSERNKVKAVFKLQFYVTQIVQSGVDALVLSIVPGDIGKVTTRLEKAAICGGVCRWESPVYETVKFVQEPKTGKFSERKYHFVVSTGLSKANSFGEVSIDFAEYAEATKLSTVSLPIKNSHCDAVLHVSIHRLQENNDKREEEQCEDDKLKSHDRSLRTYLSNGDIDASTKSDSSEDVSAKVKTNGAELNTDCRTSSGSDITLSSSDGSSGLDTPRELGLNGSIHPNNNGFLSDVSHTSEPQKPAVDASASIYDVHQRSPWDWSAGSEHGLSTDGSANGSQDALPRERSNQTSDMEIERLKAEVAALARQVDVSDLELQTLRKQIIKESKRGQDLSKEIVSLKEERDTLKIECENLRSFHKRMEEAKARNRSHLESGDLRTLVEEIRQELKYEKDLNANLQLQLKKTQESNAELVLAVQDLDEMLEQKNREICGLSNKNEESKKSRELGRNLSNCETDDDEEQKELEELVKEHSNAKDTYLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSQLQEQLKLQYECSSPPAVDDLETHIRSLENQLKEQSEEFSNSLATTKALETEISRLEEEMEKQAQGFEADLDAVTRDKIEQEQRAIRAEEALRNTRVKNANTAERLQEEFRRLSMQMASTFDANEKATMRALTEASELRVQKRLCEEMLHKVKDELRSVKADYEVKLTEISNKIDMMSAQKQQILLEIEDKSKQLENQKKHEEQVSRDFSEEIQMLKAENEKLKVDISCFSEQLEQKEILRNDLKLTKKSLEESENCLHNRMVERNELVSTIALLKKEAERSLNELNRMKHLKDEEETAGRLLHLELEALRAQYSDLKCSLTEDETEKERLRKQVSQLNGELRKKDEALINIEKRFKDSNGRTQLSDGTKTNLTNKKGVSIPQNSKEMSNLREKIKMLEGLIKSKETALETSTSSFSEKERELQSKIEELENKVEEFNQSIALQKVENLNDTTHMSQENGAAVSLFKSDVYSLEKEAEISTKDDNLCDILTELSMLKEKNNSMETELKEIQQRYSEMSLKFAEVEGERQKLVMTVRNLKNNRRGQ* | 1081 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr2g1180 | 1080 | Coils | Coil | 490 | 524 | - | - | |
| Apr2g1180 | 1080 | PANTHER | MYOSIN HEAVY CHAIN-LIKE PROTEIN | 1 | 1080 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 1028 | 1076 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 294 | 321 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 948 | 982 | - | - | |
| Apr2g1180 | 1080 | Pfam | N-terminal C2 in EEIG1 and EHBP1 proteins | 9 | 143 | IPR019448 | - | |
| Apr2g1180 | 1080 | Coils | Coil | 923 | 943 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 387 | 435 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 443 | 461 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 456 | 483 | - | - | |
| Apr2g1180 | 1080 | ProSiteProfiles | C2 NT-type domain profile. | 3 | 138 | IPR019448 | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 895 | 922 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 713 | 789 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 165 | 251 | - | - | |
| Apr2g1180 | 1080 | PANTHER | MYOSIN HEAVY CHAIN-RELATED PROTEIN | 1 | 1080 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 688 | 708 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 897 | 922 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 267 | 298 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 183 | 216 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 273 | 292 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 800 | 831 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 443 | 464 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 842 | 890 | - | - | |
| Apr2g1180 | 1080 | MobiDBLite | consensus disorder prediction | 225 | 249 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 336 | 356 | - | - | |
| Apr2g1180 | 1080 | Coils | Coil | 553 | 626 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr2g1180 | Apr-Chr2 | 18036182 | 18041422 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr2g1180 | - | - | gmx:100819574 | 1668.67 |
Event-related genes