Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1172 ATGGGAAGTCCTGACATTGACAAGTCTGAAGAAACCAATAGACATATTGACAGTAACACAACAAAATGCAACTCTAAACAACAGACTGTAGAGAAAGCTAATGAACGTCCTGAATGGTTACCTGATGGCTGGAATGTGGAATTCAGAACCCGTAAAAGTGGTGCACTTATGGGATCTGGATATAAGTGTTACATTGATCCGTTGAATGGATACAAATTCTACTCAAAACCAGAGGTATTACGATATCTTGAAACTATAAAGGACAAGGATAACAGCTGCACTTTAAAGAAGGAGAAGAAACGCACCAACATGCATTCTCCAACTGATGCTGTGGTTGAGAAGTCTACCTTGGAGGATTTACCACCTGGATGGGTAAAAGAAGTAAAGATTAGGAAGAACAGCAATGGCATTCGGAAAGATCCGTTTTATAAAGATCCAGTGAATGGATATGTATTTCGTTCTAAGAAGGATGTCCTGCGCTATCTTGAATCTGGAGATATACGTTCATGTGCATTTAGGCCAAGTAGAAGGCAAATCCAAGATGAGGACAACTTAACTCCATCACCTGCTGCCAAGGGACAGAAATGGAAGCGGTCTGCAGCCAAACAACTTTCTGTAGGTGTTAGCAGCTCAGGGAAAGGGCAAGATGGGAATGTGCGATCTGGAGTGATGGTTGCTTCAGTTCTCACTTGTGAATCTGCTGTAAAGATGCATGATGGAGCTGCAAATTCTTCTGAAATGAAGAAAGCATCTGACCCAGCTAGCTCAGAACTACCAAAAAATGAATACTTGAAAGAATCAGAAAAAGTACCTGCTGCAGGTGGTGTGGAAGAGAAGGAACATGTGAATATGACGGAGAATGCTAATGAAAAGAATTACAGTAACCATAGTATATCCAAAAACAAGGAGTTCAATGTGCGTCATCGGTTTTCACCAAGACTTGCTGGAATTAAACCTGTTCAGTCAGTCAACAATGTGATCGATGAACAGACTCTTCAGGTTCCAAAAAGAAACTCGAGGAAAAGTAGAGACACTCTAGATGTTGATATGGAAAATAAATTATCTCAGCATTTCAATGGTGTCCCAGAAATTGAGCACATGCATGAAATGCAACAAGAGGTAAAGAACATAAGCAACAATATTTCTGAAGACCAAGCAGTTTCCAAAGAACAGCCATGTCAACATGAAACAGATAAAATAGAAGACAATGAGCCAGAAATTCAAACTAACTCAAACAAATCAAGTAATAAGAAAGGGAACCACATCCCTCGTCGAGCTTCAAAACGATTAGCTAGAATTGAACACGAGTCAACGAACTCCATATCCTGTGTAGAAGCAACCAAATATGAAAGCAAAAGTTCTGAGGATGAGGTCAACGTGGAATTGCAGCAAAGTGAGGGTGGGTCAGTTGCAGTGCTTTCTGATCATGCACCAATGAATGGAGAGTCAGCGAATAAAAGAAAAAAGTCTCCTAAAATCTCATCTACTGCAGAAAAACAACTAAAGAAACTTGAAGATGAAGAAATGTATGATGAGAAATCAGAACATCAACTGTCCTTTGCATTTCACTACTCTTGGTCTGACCCAAGCTTGGAATTTGCAATCAATACCCTCACGGGTGTGTTGCCACCAGTTGAGAATTCAGTTGATAATAGACCCACTTCAGTCCCTGAAACTGAGATTCAAAAACCTTTGATTGACAATGTTACAGGACAAAGTGGGAACAGTCAAAACAATTTGCTTGACACCGATATAGGAAGCAGGGACAGAAACTCCCAGGTACGCTCAAATAAACCAAAGAGAAAGAAAGAGCACAAAGTGCCTATGCGGTTATCAAAGCGACTTGCTGGCCTTGAGCCTGAGATAATACCTTCTGAAAGAGCTCTTGAATATTCCACTCGAAAGTCATGCAAAGAAGAACCAACTGCAACTGCTATTTTAACTAATCGAGTGTCTGACCATCTTTATGATGAGGAGGAAACCAAGCTTACTCTTCAAGCATCTGACAGTTTGAAAACAGAAGTACTAGGAGAATCATCAAATAAGGGTGAGAAGTCATGTGATACCCAAACAGTTCTCAAAGAACAACTGCAGAAAGTTGAAGCTGAAAATATTGATGATGAGATATCGGAGCCACAATTCCCCTTACCGTTTGGGGACTCTTGGTCGGATCCATGCCTAGAATTTGCAATCAAGACTCTCACTGGTGCTTTGCCAGTTGATGCTGGTGCTGACGTTTTGCCTGTTATGACTCCTGACATTTATGACCCACCGTATGAGGAATTGCATGGGAGTGTGGTTACAAGCATCAATGAAGTAGCTCATGATAACTCAAACCAATCACAGAACAAGAGAGAACTTAATATGACTAGTCAACCTGAGTTGAGGACCAGCTCCACATCTTGTGAAAATGCTCCTAAATTTACAACTAGAGTCTCTTATGATCAAGGCAACACAATAGGGTATTTGGATGGAAAACCTCAATATTTTAATGCTGGAAACATACCACAGCCTGTGCATCATTCTACAAATATAAACACACTAACATGTGAAGAGCCATTAAAGGAAAACGGACAAGTTTTCAAGGGTGAATCTGTCACAGCAGGGCAACAACTGATTGAAACTGAAACTATAAACAATGATAATTCTGAATTGCAGTTTTGTGCGTCGTTTATGAATTCTTGGTCAGACCCATGCCTAGAATTTGCATTTAAGACCCTTACAGGCGTGATACCAGTAGAGGAAAATTTACCCATGCAAGGATGTTTCCAGGAACCTGCTAACTATCATGAACGAAAGCATGGTGGCTCAACATTGCCAGATTTTGGATCTTCCAGCTTTTCTCAAAATGATATTTCATTTCACTATGATACAGGAGTGAAGTCAATGCAAGGGCAGCAGTCATCAACGAGCTCTTCATTCCTACCTTTGGAAAAAGCAAGCCTGCAAGGTTTCCCTGAAGTTGATCCTAAAAAACACTATCCTCAGTGCAACAATACTTTTCAAAAAAAGTGTTTTGCTTTGTTGAGAAGATATAGGTGA 3042 0.4034 MGSPDIDKSEETNRHIDSNTTKCNSKQQTVEKANERPEWLPDGWNVEFRTRKSGALMGSGYKCYIDPLNGYKFYSKPEVLRYLETIKDKDNSCTLKKEKKRTNMHSPTDAVVEKSTLEDLPPGWVKEVKIRKNSNGIRKDPFYKDPVNGYVFRSKKDVLRYLESGDIRSCAFRPSRRQIQDEDNLTPSPAAKGQKWKRSAAKQLSVGVSSSGKGQDGNVRSGVMVASVLTCESAVKMHDGAANSSEMKKASDPASSELPKNEYLKESEKVPAAGGVEEKEHVNMTENANEKNYSNHSISKNKEFNVRHRFSPRLAGIKPVQSVNNVIDEQTLQVPKRNSRKSRDTLDVDMENKLSQHFNGVPEIEHMHEMQQEVKNISNNISEDQAVSKEQPCQHETDKIEDNEPEIQTNSNKSSNKKGNHIPRRASKRLARIEHESTNSISCVEATKYESKSSEDEVNVELQQSEGGSVAVLSDHAPMNGESANKRKKSPKISSTAEKQLKKLEDEEMYDEKSEHQLSFAFHYSWSDPSLEFAINTLTGVLPPVENSVDNRPTSVPETEIQKPLIDNVTGQSGNSQNNLLDTDIGSRDRNSQVRSNKPKRKKEHKVPMRLSKRLAGLEPEIIPSERALEYSTRKSCKEEPTATAILTNRVSDHLYDEEETKLTLQASDSLKTEVLGESSNKGEKSCDTQTVLKEQLQKVEAENIDDEISEPQFPLPFGDSWSDPCLEFAIKTLTGALPVDAGADVLPVMTPDIYDPPYEELHGSVVTSINEVAHDNSNQSQNKRELNMTSQPELRTSSTSCENAPKFTTRVSYDQGNTIGYLDGKPQYFNAGNIPQPVHHSTNINTLTCEEPLKENGQVFKGESVTAGQQLIETETINNDNSELQFCASFMNSWSDPCLEFAFKTLTGVIPVEENLPMQGCFQEPANYHERKHGGSTLPDFGSSSFSQNDISFHYDTGVKSMQGQQSSTSSSFLPLEKASLQGFPEVDPKKHYPQCNNTFQKKCFALLRRYR* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1172 1013 MobiDBLite consensus disorder prediction 776 802 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 173 219 - -
Apr2g1172 1013 Coils Coil 367 387 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 565 587 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 1 38 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 385 423 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 203 217 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 481 497 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 240 262 - -
Apr2g1172 1013 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 110 177 IPR001739 GO:0003677
Apr2g1172 1013 MobiDBLite consensus disorder prediction 467 497 - -
Apr2g1172 1013 SUPERFAMILY DNA-binding domain 26 97 IPR016177 GO:0003677
Apr2g1172 1013 SUPERFAMILY DNA-binding domain 119 169 IPR016177 GO:0003677
Apr2g1172 1013 CDD MBD 120 164 - -
Apr2g1172 1013 Pfam Methyl-CpG binding domain 32 88 IPR001739 GO:0003677
Apr2g1172 1013 Pfam Methyl-CpG binding domain 119 165 IPR001739 GO:0003677
Apr2g1172 1013 PANTHER OS04G0193200 PROTEIN 3 407 - -
Apr2g1172 1013 PANTHER OS04G0193200 PROTEIN 408 562 - -
Apr2g1172 1013 PANTHER OS04G0193200 PROTEIN 575 994 - -
Apr2g1172 1013 Gene3D - 115 176 - -
Apr2g1172 1013 MobiDBLite consensus disorder prediction 546 608 - -
Apr2g1172 1013 PANTHER OS04G0193200 PROTEIN 408 562 IPR038945 -
Apr2g1172 1013 PANTHER OS04G0193200 PROTEIN 3 407 IPR038945 -
Apr2g1172 1013 PANTHER OS04G0193200 PROTEIN 575 994 IPR038945 -
Apr2g1172 1013 Gene3D - 6 114 - -
Apr2g1172 1013 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 30 100 IPR001739 GO:0003677
Apr2g1172 1013 MobiDBLite consensus disorder prediction 389 406 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1172 - - aprc:113854032 1994.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1172 2 17970447 17977750 Apr2g1172 2 17970447 17977750 ECH