Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1155 ATGTCTTCAGAAACCCTAGAAGAGGAGAAACCTCAAGTGGGAGAACCCCTAGCTGAAGCCAATCTAGAGAGAAATATAGGGCTGTTTTCTGACTTTGTGTGGGCTGAAAATGAGGAAAAACAGAGGGCCAAGATAAGGGAGAGAATTGACAAATGTATCAAAGAAAAGTTGTTGGACTTCTGTGATGTGCTTAATATTCCAATAAACAAAACTGGTATGAAGAAGGAGGAACTGTCTGCGAAATTGTTGGAATTTTTGGAGTCCCCACATGCTACAACTGACATTCTGCTTTCTGAAAAGGAAAAGAAAGGTAAAAAGCGAACCCGAAAGGAAAGGCTTAGCAAATCTTCTGGTGAAGGATCTGAAACTCCTGCCAAGAAAGGTAAAAAGCGAACCCAAAAGGAAAGGCTCGACTCCGATTCCGACGAAGAACAACAAAACACACTTCCTCCACAGACAGTTACAGTTACTCATCAACCTTCAAATGCTTCCACTTTCCCCCCGGAGTCCGTCGACATCTCCGACGACGACGAATTCATCGACGTCTCCGACAGCCTCTCTCCGCCCTCTCCTCAGCCGCAACCTGTTCCCGGCTCTCCCGTCGCTAATTTCCTCCCTCGCCTCGGATTGGCCTTGAAGAGAGACTGGCTTGCTTCCTGTCTTTGCGAACTCCAAGCCTCCGTCACTGGCTTCGAAGGCCTCGATGTCGCCGCAAAGGCCAAGCTCTGTTTTGAGCAATTTCTGTTTGCTGATATGAACTTCTGTGGCAGCGGCGTTCTCCCTCCCAATGTGGATTCCATGCACCTTAGCGTTCTCCCTGGTCCCTACGTATTGCAGGTTGATGAAATAATCAATATTAGTTGTCCTCTACGAAGCAGATATGAACAAGCCCCTCCTGGACTTAAAAGGTGCCTGAAGTTGTCATTGACTGATGGCGTTCAGAGAGTCTTTGGGATGGAGTACAGGCCCATCCAAGCTCTTGAAGTTTGTGCATCTTCTGGTTTAAAGGTTGCTATCTCTAACGTACGTGTCCATCGTGGACTTCTGATGCTTGTCCCTGAAACCATTGAAATTTTGGGGGGATTAGTTGAGCAGCTGGATGCAGCAAGAAAACAGTTGGTTGAAGAATTAAATAAGCCGCCTAGGGGAAAAAGAACCAAAAATGGAGTGTTTCCTCCTTTAGCAACTAGAGCAACTCTTGCTGCATGGCCTTCGAGTGGAGTTGATGATATTGGGCAAAGTGGCTCTACATTGCACAGTACTGATTCTATCCAGGCAAACAGCCAAGGTGCTGGCCTGAGCATTTCTGGCACTGGTAACATCTTCACAACTGATGATACTTTTGTCATGGGTGCACAAAATTCTGCTTCTAATTCAATACCCCACATGCTGTCAAATGCTGAGGCCATGAACATAAATATGCATGGGGACATCAATCCGATGTCCCGTGCCAATTCTATGGCGAACCAGTTCTCTTCTATTATCTCAGAGGCTGAGGATATGCACATAGATGTTGCTAATGTCTCCAGGGAAGATTCTGTTGATAATCAGTCTTCTCACATGCGATCAAATGTTGCAGCTGCACATAAGGATACTGTTCATACAACCAGAGAAAGTTCTGGGGCTACTGAGTGCCCTCCTGTTGTTGAAAATGTTGAGACAAGCAGGGATAGAATTAATCTAACCACAGATAATGCTCTTCCGAGAAGATCCTCCTCCACTATCTCAAACACTAGTGATATACAGATGGTTGATGGCAGTGACTGCCCAGTCACAGTGTCCGGAGTCCAAGAGGTTCCATTCACATACTTAGCTAGTTTGTCAGCCAAGTGGGTTGCAATGAAGGAGAAAGCTCCTTCGATTCAGGGTAAAATTAAGTGCTTTTTGACTGGTGTAAAAGGATTCCAGTATAAGAAAAGGACAACATATGAGCTTCTGGCATATGTAGACGATGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTATTCTGCCCAGGAGGTCACTGCAGCTCTTTCTTCTCCTGACACGAATGTTGTCCACAACATGAAGGATACAATGCGCAAATTTCAAACCTTTTTAGCAAATTTTGAGGGAGTAATACTTGTGGAATTAAATAGAAAATCTTCCCTTCCACTTGCCTTAGATATGAATCAAGGTTGTCCTCAATCCGATGCGTGGTTACTTCTGAGAAGACTGAAGACTCTTTACCCTGCACAAGTTCAAACACATTTTCCTTCGGATCCAATTGAATTATCCCCGTAA 2289 0.4478 MSSETLEEEKPQVGEPLAEANLERNIGLFSDFVWAENEEKQRAKIRERIDKCIKEKLLDFCDVLNIPINKTGMKKEELSAKLLEFLESPHATTDILLSEKEKKGKKRTRKERLSKSSGEGSETPAKKGKKRTQKERLDSDSDEEQQNTLPPQTVTVTHQPSNASTFPPESVDISDDDEFIDVSDSLSPPSPQPQPVPGSPVANFLPRLGLALKRDWLASCLCELQASVTGFEGLDVAAKAKLCFEQFLFADMNFCGSGVLPPNVDSMHLSVLPGPYVLQVDEIINISCPLRSRYEQAPPGLKRCLKLSLTDGVQRVFGMEYRPIQALEVCASSGLKVAISNVRVHRGLLMLVPETIEILGGLVEQLDAARKQLVEELNKPPRGKRTKNGVFPPLATRATLAAWPSSGVDDIGQSGSTLHSTDSIQANSQGAGLSISGTGNIFTTDDTFVMGAQNSASNSIPHMLSNAEAMNINMHGDINPMSRANSMANQFSSIISEAEDMHIDVANVSREDSVDNQSSHMRSNVAAAHKDTVHTTRESSGATECPPVVENVETSRDRINLTTDNALPRRSSSTISNTSDIQMVDGSDCPVTVSGVQEVPFTYLASLSAKWVAMKEKAPSIQGKIKCFLTGVKGFQYKKRTTYELLAYVDDGSLISEILIDHDVVQKGIGYSAQEVTAALSSPDTNVVHNMKDTMRKFQTFLANFEGVILVELNRKSSLPLALDMNQGCPQSDAWLLLRRLKTLYPAQVQTHFPSDPIELSP* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1155 762 Coils Coil 35 55 - -
Apr2g1155 762 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 199 744 - -
Apr2g1155 762 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 600 741 IPR032199 GO:0000166
Apr2g1155 762 MobiDBLite consensus disorder prediction 112 143 - -
Apr2g1155 762 SMART DUF1767_2 202 295 IPR033472 -
Apr2g1155 762 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 199 744 - -
Apr2g1155 762 MobiDBLite consensus disorder prediction 144 169 - -
Apr2g1155 762 MobiDBLite consensus disorder prediction 522 545 - -
Apr2g1155 762 MobiDBLite consensus disorder prediction 96 200 - -
Apr2g1155 762 Pfam RecQ mediated genome instability protein 209 372 IPR013894 -
Apr2g1155 762 Gene3D - 251 378 IPR042470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1155 Apr-Chr2 17814167 17820607 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1155 K10990 - gmx:100803734 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1155 2 17814167 17820607 Apr2g1155 2 17814167 17820607 ECH