Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1153 ATGTCTTCAGAAACCCTAGAAGAGGAGAAACCTCAAGTGGGAGAACCCCTAGCTGAAGCCAACCTTAGCAAGCAAGAAAACGAAGCTGCAGAATCTGAAGAAGAAGATAATTCGGAGAAGAAAGACGTCGATGAGAAAAGCCAAGTGGAAGAGAAGAAGGAAGAAGAAGCAGATGATGAAGAGGACGAAGAGGAAGGGAGGAAGAAGCGTGTCAAAGTCAAGTCAAACAAGTCAACCAAAGAAAGCGATCCCGCTACGCCAGCAATTGAGAGACCAACTAGGGAGAGGAAAACGGTGGAGAGATACACTGTTTCTTCGCCTTCTAAGTTTCCGAGGTCTTCTTCAAGCAAAGCTTTGTCAATTGAAAAGGGCAATGGTACGCAGCTGAAGGACATCCCAAATGTGGCTTTCAAGTTATCAAAGAGAAAAGCGGATGACAACCTGCGTATGCTTCATAATATACTGTTTGGGAAAAGGGGAAAGGCACACAATCTAAAGAGAAATATAGGGCTGTTTTCTGGCTTTGTGTGGGCTGAAAATGAGGAAAAACAGAGGGCCAAGATAAGGGAGAGAATTGACAAATGTATCAAAGAAAAGTTGTTGGACTTCTGTGATGTGCTTAATATTCCAATAAACAAAACTGGTATGAAGAAGGAGGAACTGTCTGCGAAATTGTTGGAATTTTTGGAGTCCCCACATGCTACAACTGACATTCTGCTTTCTGAAAAGGAAAAGAAAGGTAAAAAGCGAACCCGAAAGGAAAGGCTTAGCAAATCTTCTGGTGAAGGATCTGAAACTCCTGCCAAGATGCAAAAGCAAACTTCACAAGTTGGGAAAAAGCGAAACCAGTCTTCTGACACTGAGGAAGATGATGCAGCTGAACCTTCGGATGTTAAAGATGATTCTCAGGAAGATGATGTCTCAATACCAAAAAGTGACAGTGATCATGAGGAAAGCGAATCCGAGAAAGAGGATGATAAAGAAAAGGCTCGCAAACGTACTTCAAAAAAGACTCTGAAGGATGAGCGAAGTCCACCTCTAAAGAAGACCACCGCTGTAAAGACTGCCAAGAGCAGTGAAAAAACTCCTAAAAAATCTACTTCAAAAAAAGCTTTTACTGTCAGTACATCTAAGTCCAAGCAACCTGTGTCCAAGAAACAGGAAACCGTAAAGGAAAGCCAGGACTCTAAAGGGAAGGTTGCAAACAAAAAACGAACTGAAAAGTCTTCAGCAAAGGATCAAGGCAAAGGAAAAAGTAGTAAGAAGGCCAAGACAGAACCTACGAGGGAGGAGATGCATACTGTGGTTGTGGATATTTTGAAGGAAGTTGATTTCAATACTGCAACTTTATCTGATATTCTCAGGCAACTTGGTACCCACTTTGGCTTGGATTTAATGTATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAGCATGTCTGATGAAGATGGAGACGAAGCGGAGGATGGTGAGGATGACGATGCAGATAAAGATAATGCGTAA 1515 0.4185 MSSETLEEEKPQVGEPLAEANLSKQENEAAESEEEDNSEKKDVDEKSQVEEKKEEEADDEEDEEEGRKKRVKVKSNKSTKESDPATPAIERPTRERKTVERYTVSSPSKFPRSSSSKALSIEKGNGTQLKDIPNVAFKLSKRKADDNLRMLHNILFGKRGKAHNLKRNIGLFSGFVWAENEEKQRAKIRERIDKCIKEKLLDFCDVLNIPINKTGMKKEELSAKLLEFLESPHATTDILLSEKEKKGKKRTRKERLSKSSGEGSETPAKMQKQTSQVGKKRNQSSDTEEDDAAEPSDVKDDSQEDDVSIPKSDSDHEESESEKEDDKEKARKRTSKKTLKDERSPPLKKTTAVKTAKSSEKTPKKSTSKKAFTVSTSKSKQPVSKKQETVKESQDSKGKVANKKRTEKSSAKDQGKGKSSKKAKTEPTREEMHTVVVDILKEVDFNTATLSDILRQLGTHFGLDLMYRKAEVKDIITDVINSMSDEDGDEAEDGEDDDADKDNA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1153 504 MobiDBLite consensus disorder prediction 368 383 - -
Apr2g1153 504 PANTHER DEK PROTEIN 1 501 IPR044198 GO:0003677|GO:0006325
Apr2g1153 504 MobiDBLite consensus disorder prediction 103 123 - -
Apr2g1153 504 Coils Coil 178 198 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 481 504 - -
Apr2g1153 504 Gene3D - 419 482 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 63 79 - -
Apr2g1153 504 PANTHER OS01G0924900 PROTEIN 1 501 - -
Apr2g1153 504 SUPERFAMILY DEK C-terminal domain 420 481 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 302 367 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 261 281 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 1 124 - -
Apr2g1153 504 Pfam DEK C terminal domain 427 479 IPR014876 -
Apr2g1153 504 MobiDBLite consensus disorder prediction 384 432 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 239 432 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 87 102 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 34 53 - -
Apr2g1153 504 Coils Coil 15 63 - -
Apr2g1153 504 MobiDBLite consensus disorder prediction 483 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1153 Apr-Chr2 17799483 17805861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1153 K17046 - gmx:100785644 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1153 2 17799483 17805861 Apr2g1153 2 17799483 17805861 ECH