Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1149 ATGAAGATACGGTCGACCTTAACGTCGTCCTTGTTGTTCCTAGGAATCCTCGCTTTTGTTGCAGCTGGCGAAAGAAGTGAAGCAAGGAGAATGTTAGAGGACAAATGCAGAAAATCTGATATTGAAATAAATCAAAGTCCAACAGTTCCACTTCCAAGTGGCATTCCCACATACAAGGTAGAGATAGCTAACACTTGCGTGAGTGGGTGCAACATTTCTAACATTCACCTTTCATGTGGGGGGTTCAGTTCTGCACGCCTTATCAACCCAACAATCTTCAAGCGCTTAAGCTACAATGATTGCCTTGTTAATGATGGCAAACCCTTAAGCAGTGGTGCCATTATTTCCTTTGATTATGCCAATTCATTCCGTTATGTTCTCTCCGTTTCCTCTGTGGCCTGTGTTTGA 408 0.4314 MKIRSTLTSSLLFLGILAFVAAGERSEARRMLEDKCRKSDIEINQSPTVPLPSGIPTYKVEIANTCVSGCNISNIHLSCGGFSSARLINPTIFKRLSYNDCLVNDGKPLSSGAIISFDYANSFRYVLSVSSVACV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1149 135 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 25 135 IPR040361 -
Apr2g1149 135 PANTHER PROTEIN TAPETUM DETERMINANT 1 25 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1149 Apr-Chr2 17760221 17761061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1149 16 129 Glycosyltransferase AT4G32110 29.825 6.45e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1149 - - gmx:100792919 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1149 2 17760221 17761061 Apr2g1149 2 17760221 17761061 ECH