Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1119 ATGGGTAACTGCTGCTCCGATGTCGCCGGAGGCCGTGCGGCCGTCGGCGGCACCGCCGGCAGCCACTTCAATCCAGCCAACGCTCCAAACGACGCCGTCGATAACTTCCTCAGGTCTCGTGGCTACCACGGTGTCTTCTCTCAGATCGAGTTGTCGTTTTCTGCTTCTGGCTTGCGTGATCGTGATGTACTCTCCAAGAGTGATCCAATGGTGGTTCTTTACTCAAGAGGAAAAAACAGAGCGCTTGAGGAACTTGGCCGGACAGAAGTAATTTTGAATTCGTTAAATCCTAAATGGATTACTAAACACACTCTCATTTATCATTTTGAGGTTGTTCAGGTTTTAGTGTTTCGTGTATATGATGTTGATACTCAGTTCCACAATGTAGATGTAAAGATGCTTAGGCTAGAAGAGCAGCAATATCTAGATTCTATCAGATCTACCCAATCCCAAAACTGTGGAAAGCTCTTGGTGCGTGCAGAGGAATGTGTTACCTCAAAGACTACAATAGAGATGATACTTAAGTGTTCTGATTTGGAATACAGGGATCTCTTCTCAAGAAGTGATCCCTTTTTGTTGGTATCAAAAGTCGTGGAAGGTGGTGCCCAAATTCCAATTTGCAAAACAGAAGTTATTAAAAATGATCACAACCCAGCATGGAAGCCAGTGTTCTTGAATATTCAACAAGTAGGAAGCAAGGAAAGTCCTTTGATAATAGAGTGCTATAACTTTAATAGCAATGGCAAACATGATTTGATGGGAAAAGTGCAGAAATCTTTGGTGGACTTGGAGAAACTTTATTCTAGTGGCCAAGGAGAAAATTTACTTTTGCCCACTGCTGTGGGTCATAATTCTCACAACAAGATGTTAAAGAGCCAGATATATGTGGAAAAATTTGTTGAAAGTATCCAATATACTTTCCTGGATTACTTGACCGGGGGATTTGAATTGAACTTCATGGTGGCCATTGATTTTACAGCTTCAAATGGAAATCCACGCCTTCCAGATTCTTTGCATTATATTGATCCGTCAGGACGGCCAAATGCATACCAGAGGGCAATTTTAGAGGTTGGGGAGGTGTTACAGTTTTATGATTCAGACAAGCGATATCCTACTTGGGGATTTGGAGCACGGCCTATTGATGGTCCTGTCTCTCATTGTTTCAACTTGAACGGAAGTAGTCATTACTGTGAGGTGGAAGGCATCCAAGGAATTATGATGGCATACACAAGTGCCCTGCTTAACGTTTCTCTTGCAGGACCTACTCTTTTTGGACATGTCATAAGCAATGCTGCACTGATGGCCAGCCAATCGGTAGCAAATGGGGGAAGAAAGTACTTTGTTTTGTTAATCATCACAGATGGAGTGGTGACAGATCTCCAAGAAACAAAAGATGCTCTTGTTAAAGCATCTGATCTACCCCTATCAATCCTTATTGTTGGGGTAGGAGGAGCTGATTTCAAAGAAATGGAGATTTTGGACGCAGACAAGGGAGAGAGGCTTGAAAGTTCATCTGGTCGCGTTGCTTCACGTGATATAGTCCAGTTTGTTCCATTTCGGGATGTTCAAAGTGGAGAAATTTCAGTAGTTCAAGCACTTCTAGCTGAATTACCTACACAATTTTTAACTTACATGCGGAGCAGAAATATCCAACCGACTCTCTAG 1665 0.427 MGNCCSDVAGGRAAVGGTAGSHFNPANAPNDAVDNFLRSRGYHGVFSQIELSFSASGLRDRDVLSKSDPMVVLYSRGKNRALEELGRTEVILNSLNPKWITKHTLIYHFEVVQVLVFRVYDVDTQFHNVDVKMLRLEEQQYLDSIRSTQSQNCGKLLVRAEECVTSKTTIEMILKCSDLEYRDLFSRSDPFLLVSKVVEGGAQIPICKTEVIKNDHNPAWKPVFLNIQQVGSKESPLIIECYNFNSNGKHDLMGKVQKSLVDLEKLYSSGQGENLLLPTAVGHNSHNKMLKSQIYVEKFVESIQYTFLDYLTGGFELNFMVAIDFTASNGNPRLPDSLHYIDPSGRPNAYQRAILEVGEVLQFYDSDKRYPTWGFGARPIDGPVSHCFNLNGSSHYCEVEGIQGIMMAYTSALLNVSLAGPTLFGHVISNAALMASQSVANGGRKYFVLLIITDGVVTDLQETKDALVKASDLPLSILIVGVGGADFKEMEILDADKGERLESSSGRVASRDIVQFVPFRDVQSGEISVVQALLAELPTQFLTYMRSRNIQPTL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1119 554 SMART VWA_4 316 513 IPR002035 -
Apr2g1119 554 PANTHER CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING COPINE FAMILY PROTEIN-RELATED 143 553 - -
Apr2g1119 554 PANTHER CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING COPINE FAMILY PROTEIN-RELATED 1 143 - -
Apr2g1119 554 Pfam C2 domain 54 126 IPR000008 -
Apr2g1119 554 Pfam C2 domain 173 264 IPR000008 -
Apr2g1119 554 Gene3D C2 domain 172 301 IPR035892 -
Apr2g1119 554 SMART C2_3c 48 145 IPR000008 -
Apr2g1119 554 SMART C2_3c 173 272 IPR000008 -
Apr2g1119 554 Gene3D C2 domain 52 161 IPR035892 -
Apr2g1119 554 ProSiteProfiles C2 domain profile. 28 151 IPR000008 -
Apr2g1119 554 Pfam Copine 337 552 IPR010734 -
Apr2g1119 554 CDD C2B_Copine 170 265 IPR037768 -
Apr2g1119 554 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 128 IPR035892 -
Apr2g1119 554 CDD C2A_Copine 47 123 - -
Apr2g1119 554 CDD vWA_copine_like 287 541 IPR010734 -
Apr2g1119 554 PANTHER COPINE 1 143 IPR045052 GO:0005544
Apr2g1119 554 PANTHER COPINE 143 553 IPR045052 GO:0005544
Apr2g1119 554 ProSiteProfiles C2 domain profile. 152 277 IPR000008 -
Apr2g1119 554 SUPERFAMILY vWA-like 317 499 IPR036465 -
Apr2g1119 554 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 151 264 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1119 Apr-Chr2 17458449 17466479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1119 - - gmx:100807801 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1119 2 17458449 17466479 Apr2g1119 2 17458449 17466479 ECH