Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1116 ATGACAGAGAAAACAACGTTTGATTCCAACGAAAATTTGGGGTATGCAATTGCGCGAGTAGAGAAAGATAGCCCTGAGACTGTAGTCGCCAAAGTCCGTCTCATGAAAGCACTCGTTCAAACACGGGATCCCTCTTCTAAGGAAGAGGATGATTTGTCATTTAGAAGATTCCTGCGCGCCCGTGATTTAGATGTGGAAAAGGCTTCGGCAATGTTCCTCAAATACTTGAAATGGAGACACTCTTTTGTTCCAAATGGTTCTATATCTCTGTCAGAGGTTCCAAATGAACTTGCACAAGACAAGATGTTCGCCCAAGGACATGATAAGATAGGTCGACCTATAACTATTGTCTTCGGTAGAAATCATTTTCAAAACAAAGATGGCGGTCTCGATGAATTCAAACGTATGTTTAATCCCTATGCATGTTCCAGGTTTGTAGTCTATGGTCTTGATAAACTATGTGCAAGTATGCCACCTGGGCAAGAGAAATTTGTAGGTATAGCAGAACTTCAGGGATGGGGATACTCAAACAGTGACATGCGTGGATACGGGAGTGCTCTATCTATTTTGCAGGATTATTACCCCGAAAGGTTGGGCAAGTTGTTTATTGTCCATGCACCATATATTTTTATGACAGTGTGGAAAATTATTTACCCCTTCATTGACAACAAAACCAAGAAGAAGATAGTATTTGTGGAGAGCAATAAAGTGAAATCAACACTGCTAGAAGACATAGACGAAAGTCAGCTTCCAGAGATCTACGGTGGCCCACTACCATTAGTCCCGATTCAGGATAGCTGA 801 0.417 MTEKTTFDSNENLGYAIARVEKDSPETVVAKVRLMKALVQTRDPSSKEEDDLSFRRFLRARDLDVEKASAMFLKYLKWRHSFVPNGSISLSEVPNELAQDKMFAQGHDKIGRPITIVFGRNHFQNKDGGLDEFKRMFNPYACSRFVVYGLDKLCASMPPGQEKFVGIAELQGWGYSNSDMRGYGSALSILQDYYPERLGKLFIVHAPYIFMTVWKIIYPFIDNKTKKKIVFVESNKVKSTLLEDIDESQLPEIYGGPLPLVPIQDS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1116 266 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 21 266 - -
Apr2g1116 266 SUPERFAMILY CRAL/TRIO N-terminal domain 17 85 IPR036273 -
Apr2g1116 266 SMART sec14_4 96 259 IPR001251 -
Apr2g1116 266 Pfam CRAL/TRIO domain 101 256 IPR001251 -
Apr2g1116 266 PANTHER OS03G0850700 PROTEIN 21 266 - -
Apr2g1116 266 CDD SEC14 106 256 IPR001251 -
Apr2g1116 266 Gene3D - 3 264 IPR036865 -
Apr2g1116 266 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 90 262 IPR001251 -
Apr2g1116 266 SUPERFAMILY CRAL/TRIO domain 92 259 IPR036865 -
Apr2g1116 266 SMART CRAL_TRIO_N_2 50 75 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1116 Apr-Chr2 17430623 17436778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1116 56 252 Acyl Lipid Metabolism Gene Families AT5G47730 27.619 2.92e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1116 - - gmx:548015 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1116 2 17430623 17436778 Apr2g1116 2 17430623 17436778 ECH