Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0522 ATGATGTCTGTGACTGGCAAAAACTTGCTCTCTTGTGGTTGTTCTTCCAATGCTTCGTTTGATAGGTCCACGGTGAGGAATTTTGCAAAGGTTAATTCCAAAGGGTGGGGTAGAGGCCATGGAGCTCGTAAATCGTTTTGTTGTAAGAGGAGGAGCACTCAATGCAGGGTTTCTTCTATGAAGCCTGCACAACCTACTGTGAATGGGGGGACTCAAGCAATTGAAGGGCTTACAACAGGGTTGGACTTGAAGAGTTATTCAGAAACCCCCATTTCCCCAGCTCGGTTGTTTGAAGTGGTTGCTGATGATTTGCAAACTCTCAATAAAAATCTTCAGTCGATTGTAGGTGCAGAAAATCCAGTTTTAATGTCTGCAGCTGAACAGATCTTTAGTGCTGGTGGGAAGAGGATGAGACCAGCTTTGGTGTTCTTGGTGTCAAGGGCAACAGCTGAGTTACTTGGCTTGAAGGAAATTACTGTAAAGCATCGACGTTTAGCTGAAATTATTGAAATGATTCATACTGCAAGTTTGATACACGATGATGTATTAGACGAAAGTGATCTAAGAAGAGGGAAGAAAACTGTTCATCAAATGTTTGGAACAAGAGTTGCAGTTCTTGCTGGAGACTTCATGTTTGCACAGTCATCATGGTATCTAGCCAACCTTGAAAATATCGAAGTCATTAAACTTATCAGCCAGGTGATCAAAGATTTTGCAAGTGGGGAAATAAAGCAGGCTTCTAGCTTGTTTGACTGTGATGTTCAACTTGACGAGTATCTAATTAAGAGCTATTATAAGACAGCTTCCTTGATTGCTGCCAGTACAAAAGGAGCTGCAGTTTTTAGTGGTGCTGACAGCAGCATCACTGAGAAGATGTATGAATATGGAAAGAATCTTGGTCTATCCTTCCAAGTTGTGGATGACATATTGGATTTCACGCAATCAGCGGAGCAACTGGGAAAGCCTGCTGGCACTGACCTTGCCAAGGGTAATCTGACTGCTCCAGTAATATTTGCGTTGGAGAAGGAACCAAAATTGAGGGATATCATTGAATCTGAATTTAGTGAGGTTGGTTCCCTTGATGAGGCCATCAAGTTGGTCAAGAGTTGTGGGGGGATTGAAAGAGCACAAGAATTGGCAAAAGAGAAAGCTGATCTTGCAATTCAAAGTCTCCAATGCCTCCCTCAAAGCATGTTTCGTTTAGCTCTCCAGGATATGGTCGTATATAATCTTCAACGAATAGCATAA 1248 0.4231 MMSVTGKNLLSCGCSSNASFDRSTVRNFAKVNSKGWGRGHGARKSFCCKRRSTQCRVSSMKPAQPTVNGGTQAIEGLTTGLDLKSYSETPISPARLFEVVADDLQTLNKNLQSIVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELLGLKEITVKHRRLAEIIEMIHTASLIHDDVLDESDLRRGKKTVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVQLDEYLIKSYYKTASLIAASTKGAAVFSGADSSITEKMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSEVGSLDEAIKLVKSCGGIERAQELAKEKADLAIQSLQCLPQSMFRLALQDMVVYNLQRIA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0522 415 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 8 414 - -
Apr2g0522 415 ProSitePatterns Polyprenyl synthases signature 1. 177 191 IPR033749 -
Apr2g0522 415 Pfam Polyprenyl synthetase 121 366 IPR000092 GO:0008299
Apr2g0522 415 SFLD Isoprenoid Synthase Type I 125 405 - -
Apr2g0522 415 Gene3D Farnesyl Diphosphate Synthase 92 414 IPR008949 -
Apr2g0522 415 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 8 414 - -
Apr2g0522 415 ProSitePatterns Polyprenyl synthases signature 2. 299 311 IPR033749 -
Apr2g0522 415 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 92 414 - -
Apr2g0522 415 CDD Trans_IPPS_HT 117 413 IPR000092 GO:0008299
Apr2g0522 415 SUPERFAMILY Terpenoid synthases 95 413 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0522 Apr-Chr2 6001015 6005185 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0522 K05356 - gmx:100783538 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0522 2 6001015 6005185 Apr2g0522 2 6001015 6005185 ECH