Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0521 ATGGCTAAAGTAGCTGTTCTCTTTTTCCTTATCGTCTTATCTCTCTCTTCAGGAGGGAATATGATAAAGGTTAATGGGCAGAAAACTTGGTGCGTGGCAAAGCCTTCATCAGACCAGGCTACCCTTTTAGCCAACCTCAATTATGCTTGCTCTCAAGTTGATTGCAAGATTCTGCAGAGAGGTTGCCCCTGCTCTTACCCTGACAATCTCATGAACCATGCCTCCATTGCCATGAATCTCTATTACCAGTCTAGAGGAAGGAACCACTGGAACTGTGATTTCAGGGCCTCTGGCCTCGTTGTTATCACCGATCCAAGTTATGGTAATTGCATTTATGCATAG 342 0.4474 MAKVAVLFFLIVLSLSSGGNMIKVNGQKTWCVAKPSSDQATLLANLNYACSQVDCKILQRGCPCSYPDNLMNHASIAMNLYYQSRGRNHWNCDFRASGLVVITDPSYGNCIYA* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0521 113 Gene3D - 24 111 - -
Apr2g0521 113 PANTHER BETA-1,3 GLUCANASE 5 113 IPR044788 -
Apr2g0521 113 SMART X8_cls 29 112 IPR012946 -
Apr2g0521 113 Pfam X8 domain 29 97 IPR012946 -
Apr2g0521 113 PANTHER MAJOR POLLEN ALLERGEN OLE E 10-LIKE 5 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0521 Apr-Chr2 5994923 5996117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0521 17 110 Glycoside Hydrolase AT2G05790 42.708 2.81e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0521 - - gmx:100784427 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0521 2 5994923 5996117 Apr2g0521 2 5994923 5996117 ECH