Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0503 ATGCAAGCATCAATAGCATGTTCTCCACACGCATATGGAGTTGTCAAAGTTAGGGTGCAATCACAACACACCAACCTTGTTCCAACAACCACTTCCCTCAAACATAACTCTACTTTGACTCGATCCAAATCAATTTCTAAGCTCACACTCAGATGCAAGCTTCAACCTCAACCACTGCTGAACCTTTTCACATTAAAATCACCGAGAATATGCAACACCAAGGTGGGTCCACTTCGGTGTGGCATTTCGTCTAACGGGTATGGTGCAAACGAAGGTAAGAGTCTGAGGGAATGGGTTGAGCTGGTTGGTGAGGTCCTATCAACGGCATTTCCGTTGTGGGTGACAATTGGGTGTGTTTTGGGGTTGTTGAAACCCAATTGCTTCAATTGGGTCACTCCAAAATTGAGTATTGTGGGCCTCACCATTATTATGCTTGGTATGGGTATGACTCTCACTCTTGATGATCTTCGTGGGGCTCTTGCTATGCCTAAGGAAGTCCTCTCTGGTTTTGTCCTTCAATATTCGGTGATGCCACTGTCTGGATATTTTGTAAGCAAAATCTTAAACCTTCCATCTCATTATGCAGCAGGTTTAATATTAGTTGGCTGCTGTCCAGGAGGCACAGCAAGTAATATTGTTACATATCTTGCACGTGGAAATGTGGCGCTTTCAGTGATAATGACAGCTGCAAGCACTCTATCTGCCGTGATCATGACTCCTTTTCTGACAACCATACTTGCTGATAAATATGTAGCAGTAGATGCAGCTGGCTTATTGATTTCAACATTGCAAGTTGTGTTTTTTCCTGTGTTGGCTGGTGCATTTCTGAATCAATATTTCCACTCTCTTGTTAAATTTATCTCTCCTTTGATGCCAACCATGGCAGTAGCAACTGTGGCAATTCTTTGTGGAAATGCCATTGCCGAGAGCTCTTCAGCAATCCTTATGTCTGGTGGACAAGTAATTTTAGCATCATCTCTTCTTCATGCTTCAGGGTTTTTCTTTGGTTACATACTTGCAAGGATGCTCGGGCTAGACGTGTCATCATCGCGAACCATATCCATTGAGGTTGGCATGCAGAACTCGGTTCTTGGGGTTGTTTTAGCTACCAAGCACTTTGGAGATCCCCTAACTACAGTGCCTTGTGCTGTGTCAAGTGTGTGTCACTCAATCTTTGGTAGCATCCTAGCAGGAATATGGAGACGCTCTGTGCCTACTGAGATGGACTGA 1230 0.4407 MQASIACSPHAYGVVKVRVQSQHTNLVPTTTSLKHNSTLTRSKSISKLTLRCKLQPQPLLNLFTLKSPRICNTKVGPLRCGISSNGYGANEGKSLREWVELVGEVLSTAFPLWVTIGCVLGLLKPNCFNWVTPKLSIVGLTIIMLGMGMTLTLDDLRGALAMPKEVLSGFVLQYSVMPLSGYFVSKILNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVIMTAASTLSAVIMTPFLTTILADKYVAVDAAGLLISTLQVVFFPVLAGAFLNQYFHSLVKFISPLMPTMAVATVAILCGNAIAESSSAILMSGGQVILASSLLHASGFFFGYILARMLGLDVSSSRTISIEVGMQNSVLGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRRSVPTEMD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0503 409 Gene3D - 94 403 IPR038770 -
Apr2g0503 409 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 32 408 - -
Apr2g0503 409 Pfam Sodium Bile acid symporter family 138 308 IPR002657 GO:0016020
Apr2g0503 409 PANTHER SODIUM-BILE ACID COTRANSPORTER 32 408 IPR004710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0503 Apr-Chr2 5841021 5844237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0503 79 409 Organic Solute Cotransporters AT1G78560 75.831 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0503 K03453 - gmx:100788639 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0503 2 5841021 5844237 Apr2g0503 2 5841021 5844237 ECH