Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0473 ATGGGTTGTGCTGGATCCTCACAATCCAAGCCTGATGGGACAGTAAAAAAGATCCGAAAGCCTAAGCCTTGGAAGCATCCTCAGCCCATAACAAAGACTCAGCTGATACAATTGCGGGATGAGTTTTGGGATACAGCTCCTCACTATGGTGGTCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCTGAGGCTGATCTAGCTTTAGCACAAGCAATTGTGGAAAGTGCTGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAGTACGAGCTACCCAAGTACGTTTTGAGCGAGCCAACTAACCTGATTCGGGACAGTTAA 345 0.4725 MGCAGSSQSKPDGTVKKIRKPKPWKHPQPITKTQLIQLRDEFWDTAPHYGGRKEIWDALRAAAEADLALAQAIVESAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0473 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Apr2g0473 114 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 111 - -
Apr2g0473 114 Gene3D - 31 104 IPR038169 -
Apr2g0473 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
Apr2g0473 114 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0473 Apr-Chr2 5446388 5451083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0473 - - gmx:100306399 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0473 2 5446388 5451083 Apr2g0473 2 5446388 5451083 ECH