Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0472 ATGAGAAACCATCTTCTATTCTTATACGTTCTCATTGCACTAGCCCCCACTTTCTCTCTCCACTCTCAACCTCACGCTGCTCCTGCAGGGCCGTTGATTAAGCATCTCTCTTCGCTCATCAAATGGACAAGGTCTACCTCCAAGACGCCACACTCAGACGGGAATGTTCTTCAATTCGAGAATGGTTATGTGGTTGAGACTGTTGTAGAAGGAAACGAGATTGGGGTCATCCCTTACAGAATCCGTGTCTCTGAAGAAGATGGTGAACTCTTTGCTGTTGATGCAAGTAATAGCAACATTGTTCGAATCACTCCGCCTTTGTCCCAATATAGTAGAGGAAGATTGGTTGCTGGGTCATTTCAGGGCTACACTGGCCATGTGGATGGAAAGCCAAGTGACGCTCGTTTCAATCATCCCCAAGGCATAACCATGGATGATAAAGGGAATGTATATGTTGCTGATACTCATAATCTGGCCATCAGAAAGATTGGAGATGCTGGTGTGACAACCATTGCTGGAGGAAAGTCACCTGTTGCAGGCTACAGGGATGGGCCTAGTGAGGATGCTAAGTTCTCAAATGATTTTGATGTGGTATATGTTCGGCCTACATGTTCCTTGTTGGTTATTGATAGGGGAAATGCTGCTCTTCGGCAAATCTATCTTGACCAAGAGGACTGTGATTATCAGTCTAGTTCAATTTCCAGTACAGATATCCTTACTGTTGTTGGTGCTGTTCTGGTAGGATATGCTACATGTATGCTTCAGCAGGGGTTTGGATCCTCTTTCTTCTCAAAAGCAACTATACAAATGCTGCAGCAACCATCAGAAAGAGAGTTCAAAGTGCAAGCAAGCAATGAGAAACACATGCCAATCCTAGAGAGCAGTAAAGAAGAGCCTGGATGGCCATCTTTTGGGCAGCTTGTTGTTGATCTTTCTAAACTTTCCCTTGAAGCATTGGCGAGTGCATTCACTCAATTCATACCATCGCATTTCAGATCTGGCAATTCCAAGAGAGGCCTAACACCACTGAAAGATCGTCTTTTGATGCCTGAAGATGAAGTGCAGCCTCCATTGGTCAATAGGAAAAATGCTCCTATTCCTCTTACTGAAAATAGGCAGATACCACAGGTCCATACTCCAAGCACAACTGAAAAATATTCAGAAATGAAGCCCCCTAAGATAAAGTCAAGCAGTTTCAAGGACCCCTCCATGTCAAGTAAGCACCGTTTAAAACGACCCGAGTATGCTGAATTCTATGGATCTACTGAGATTCCTCCATACACTAAATCTAAAAGCCAGAAAGAAAGGCCAAGACATAGACAACGAGAAAAGAGTGGAGAAGTTATTTTTGGAGCCGAGGCTAAACCGGTTGAGACAAGGGCTGCTGATCATAAGAATCCAAAGTTTGATCATTACAGTATGAGGACTAAGTATGCATCCGAGGAGTCCTTTAGATTCAACTCTCAGTAA 1470 0.4381 MRNHLLFLYVLIALAPTFSLHSQPHAAPAGPLIKHLSSLIKWTRSTSKTPHSDGNVLQFENGYVVETVVEGNEIGVIPYRIRVSEEDGELFAVDASNSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPQGITMDDKGNVYVADTHNLAIRKIGDAGVTTIAGGKSPVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIYLDQEDCDYQSSSISSTDILTVVGAVLVGYATCMLQQGFGSSFFSKATIQMLQQPSEREFKVQASNEKHMPILESSKEEPGWPSFGQLVVDLSKLSLEALASAFTQFIPSHFRSGNSKRGLTPLKDRLLMPEDEVQPPLVNRKNAPIPLTENRQIPQVHTPSTTEKYSEMKPPKIKSSSFKDPSMSSKHRLKRPEYAEFYGSTEIPPYTKSKSQKERPRHRQREKSGEVIFGAEAKPVETRAADHKNPKFDHYSMRTKYASEESFRFNSQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0472 489 PANTHER NHL DOMAIN-CONTAINING PROTEIN 14 486 - -
Apr2g0472 489 SUPERFAMILY NHL repeat 60 200 - -
Apr2g0472 489 Pfam NHL repeat 136 162 IPR001258 GO:0005515
Apr2g0472 489 Gene3D - 39 220 IPR011042 -
Apr2g0472 489 MobiDBLite consensus disorder prediction 351 468 - -
Apr2g0472 489 PANTHER - 14 486 - -
Apr2g0472 489 MobiDBLite consensus disorder prediction 402 416 - -
Apr2g0472 489 MobiDBLite consensus disorder prediction 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0472 Apr-Chr2 5436885 5442112 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0472 - - gmx:100797841 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0472 2 5436885 5442112 Apr2g0472 2 5436885 5442112 ECH