Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0445 ATGGCGTTGCGTCACTTACAATTTTTCCCTTGCACAAATTTCACTCCCAAACCCAAACTCAAACTCATCAATATTTCCTTCACTCCATCACTCTCCTTCTCTTCAACCACCCCTATGGCCCCTGCTCCAAAGGTTTTGGTTCCAATCGCCGACGGCACAGAGCCTATGGAGGCCGTTATCACCGTCGATGTCCTCCGACGCTCTGGCGCCGACGTCACTGTCGCTTCTGCCTCTTCCAATCTCTCCGTTGAAGCTCTCCACGGCGTCAAGATCCTCGCCGACGCTTCCGTTTCAGACGTCGCCGACTCCGCCTTCGACCTCGTTGCTCTCCCTGGAGGGGTTCCGGGTGTTGAGAATCTGAGAGACTGTAAAGTTTTGGAAGGGTTGGTGAAGAAGCATGTTGAGGATGGACGGCTTTATGCTGCGGTGTGTGCTGCTCCTGCGGTTGTGCTTGGGCCTTGGGGTTTGCTGAATGGGTTGAAGGCAACTTGTTATCCTTCATTTATGGAGAAATTGGCCAGTTATGCTGCCTCTACCGTTGAGTCAAGGGTGCAGATGGATGGCAGAGTTGTAACCAGTCGTGCGCCAGGAACTACTATGGAGTTTGCCGTTGCACTGGTTGAGCAGTTATGTGGAAAAGAGAAAGCTGATGAAGTTGCAGGTCCACTGGTCATGCGTTCCAATCATGGTGATGAACCCACTTTTACGGAGCTAAACCCAGTGCAGTGGACATTTGACGATCTACCCAAGGTTCTTGTACCAATTGCTAATGGCACAGAGGAAATGGAAGCTGTGATTATCATTGATATTCTGCGAAGAGCAAAGGCAAAGGTTGTTGTTGCCGCTGTTGAGGATAAACTAGAGATTGTGGCATCACGTAAAGTTAAACTGGCCGCAGACATCCTTCTGGATGAAGCAGCAAAACTTTCATATGATCTTATTGTGTTGCCAGGTAAAAAGGCCACTGCCTTTCCAGCAATGAGCAACAAGTTATCGGATCAGAGTGAAGTAGAGAACAGGGTGGTAGTTGATGGCAACCTTATTACCAGCAGAGGTCCAGGAACCTCTATCGAGTTTGCATTAGCTATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCCCTAGAACTTGCAAAGACAATAGTGTTCACACGCCCGTAG 1158 0.4931 MALRHLQFFPCTNFTPKPKLKLINISFTPSLSFSSTTPMAPAPKVLVPIADGTEPMEAVITVDVLRRSGADVTVASASSNLSVEALHGVKILADASVSDVADSAFDLVALPGGVPGVENLRDCKVLEGLVKKHVEDGRLYAAVCAAPAVVLGPWGLLNGLKATCYPSFMEKLASYAASTVESRVQMDGRVVTSRAPGTTMEFAVALVEQLCGKEKADEVAGPLVMRSNHGDEPTFTELNPVQWTFDDLPKVLVPIANGTEEMEAVIIIDILRRAKAKVVVAAVEDKLEIVASRKVKLAADILLDEAAKLSYDLIVLPGKKATAFPAMSNKLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELAKTIVFTRP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0445 385 SUPERFAMILY Class I glutamine amidotransferase-like 43 227 IPR029062 -
Apr2g0445 385 Gene3D - 318 383 IPR029062 -
Apr2g0445 385 TIGRFAM not_thiJ: DJ-1 family protein 44 221 IPR006287 -
Apr2g0445 385 CDD GATase1_DJ-1 251 367 - -
Apr2g0445 385 Pfam DJ-1/PfpI family 44 209 IPR002818 -
Apr2g0445 385 Pfam DJ-1/PfpI family 250 318 IPR002818 -
Apr2g0445 385 CDD GATase1_DJ-1 45 210 - -
Apr2g0445 385 Gene3D - 37 236 IPR029062 -
Apr2g0445 385 Gene3D - 246 317 IPR029062 -
Apr2g0445 385 SUPERFAMILY Class I glutamine amidotransferase-like 249 382 IPR029062 -
Apr2g0445 385 PANTHER BNAA06G01020D PROTEIN 317 380 - -
Apr2g0445 385 PANTHER BNAA06G01020D PROTEIN 39 318 - -
Apr2g0445 385 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 317 380 - -
Apr2g0445 385 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 39 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0445 Apr-Chr2 5164998 5168096 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0445 K03152 - gmx:100803116 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0445 2 5164998 5168096 Apr2g0445 2 5164998 5168096 ECH