Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0436 ATGTCCTCAGAGATTGTGACTGTGCCTCCCAAATCTGGAACTAGTTCATCCCCCCTGACAAATGATCGTCTTTTTTTAGTTTTGGCATTCATAACTGGCTGCGATTTAATCTGTCCAGCAACAATTTTCCCTTGTTTCCTCCTTGGAGTAAACTATTTGAATCATATTGCTGGTAGCTTGGAGCCCAAAACTCTTTTTAAGTGTATTCCTCCTTTATTAGACCAATTTAAGTTGAACATCGATGGAGGTGCTTGTCTTTCTGCTGATGGAGCTAGTTGTGGGGGTCTGCTGGTTTTTATAAGGTGCTCCCACCTTGTTCTCCCCTTGCGGCATAATTGTGGAGAATTTATTGGGGTCTTGATGTTGTTATCTCTAGGGGTATCAGGGTACCTTCTTAGAAAAATTAAGTTTGTTAGGTTGAGCCATGTTTTGAGAGAGAACAACCAATGTGATGATTGGCCGGCTAAGCATAGGTCTAAGGATGTATTTAAGGTTCAAGGTCGCTATCTGCCAGAGCACGCTTCCGAATTGGTTTCAGATGGAGTTCATAATGTTGAACACAGCAAAAGTTCATACTTAGTTATTAAAGGAATTGATGAATCCTTTGAGGATGAGTGCAAGCAAATGTACGGTTTCTTGCCATGTACAAATAATATTTTTGGGCATCTCTTTCTCATTTTGGTGTATGAGTATTTGCTGTTCCATGGAGAATCATATTTGGCTAATGGAGGTGAACAAATCTTCAAGATTCTTGGCCCTGGTATCTTTGGTGCTAGTGCTTTTCATATCATTGGTGCCCTTCCAGAGTCCTTAATCCTTCTTGTCTCTGGACTTGTGAGCAGTAGGGAGATAGCACAAGAATATGGCTTTACAGGAGTTGGCTTATTGGCCGGATCATCCATTTTGCTTCTAACAGTAGTTTGGGGAAGCTGTGTTATTGCTGGCAGTCAAGAATTTGTGCATGATTCTCTCCGTTCTAACTCAGTTCATAGAAGTCTCAAAGTGTTATTGACTGGTTGTGGCATTGTTACGGATTTGGAAACCAGTTACACTGCAAGAATCATGGTTTTCTCAGTTATACCACTTGCAATCATGCAAATCCCAACTTTTTTCCAATTCTCTTCAGGCCCAAGAAGCATGACCTTAGTAGTTGCTCTCGTTATTTCCACCATTTTTCTGCTCTTGTACTTCATTTACCAGATTTTTGAACCATGGGTACAGAAAAGAAGACTGGAATATGTGAAACACGATCATTTAATACTAAGAATATTAGAACATGTTCAAAAGAACACCCTGCAAAGGATCCTCACCAAGAATGGGACTCCAAATGTGAGCGCCATAAGAAGGCTATACAGGGAAATAGATCCAGAAGGGAGCAGTGGTATATCAGCAGCTAAAGTAAAAGACCTCCTGCTTAGAAACAAAGTAACTGAAACAAATATGGATGAGGAGAAAGAAATAAAAGAGGTGTTAGAAATTTTTGACCTGGATGGTGACCAAAAAATAACTAGGGAAGAATTTGTCAGTGGTTTCACAAAATGGCTTGATCAAACAAAGCATGCTTTAGATAAACAGTATTTTTCAAGGAAATCACTCAAGGAAATATATCAGGTTTTTGGACCATGGATTGAAAACAAAAGAAAGGAACATGAAGGAAAGAAACAACTTATATCTGAAATCTTAAGGCATGTTCAGAGTGAAATGGTTGGCAACCTTCTCACAGCAGATGGCAAACCTAACGAATATGCTATCAGAAGGTTGTTTGAGAAAATTGATAGCAATAGAGATAACTGCATTTCCCACTCTGAGTTGAGAGAACTAATCATGAACATCAAATTTGTCAAATTTTCAATGGAAGTGGAGGAAGCAGTTGCTTTAGTCATTGAAGAACTTGACCTTGACAAAGACCGCATAATTAATGAGGAGGAGTTTGTAGCTGGATTTCAAAAATGGCTTAGCTCAACTTCAGCTCCTGCAATTGAGTCAGATTCTGAGTCACAAGAAGATATTTATCAGACCTGGGAAGAGGCTGATATGGTGGTGGAAGAAAAGCAAAGCAAAGCAGTAATTGACAAATCATTATGGGCCTGGTTTAAGGCCATAACATATGTGGTGCTAGGCATTGCTATGCTCTCCATTTTGGCAGAGCCCTTAATAGAAAGTGTCCACAACTTCTCTAACAGTGCAGGACTTCATCCATTCTTCATCTCATTTATTCTAGTCCCTTTGGCCACAAATGCTAGAGAAGCAACTTCAGCAATCAAAGAAGCAAAGCATAAGAAGCCTAGAACGATTTCTCTTGCCATTTCTGAGATTTATGGTGGGGTGTTCATGAATAACATTCTTGGCTTCTTTGCACTCTCAGTTTTGATCTATGTGCGAGAAATCACTTGGGAATTCTCAGCTGAATTGTTGGTCGTTGCAATTGTTTGTGCTATAACAGGCCTTACTGCAAGTTTTCACTCCATTTTTCCTCTATGGTCATCCTTCTGTGCAATTCTCTTGTACCCATTGTCCTTGGTTCTGGTTTTTGTACTCGATCATGTTCTCAATTATAATTAG 2562 0.3958 MSSEIVTVPPKSGTSSSPLTNDRLFLVLAFITGCDLICPATIFPCFLLGVNYLNHIAGSLEPKTLFKCIPPLLDQFKLNIDGGACLSADGASCGGLLVFIRCSHLVLPLRHNCGEFIGVLMLLSLGVSGYLLRKIKFVRLSHVLRENNQCDDWPAKHRSKDVFKVQGRYLPEHASELVSDGVHNVEHSKSSYLVIKGIDESFEDECKQMYGFLPCTNNIFGHLFLILVYEYLLFHGESYLANGGEQIFKILGPGIFGASAFHIIGALPESLILLVSGLVSSREIAQEYGFTGVGLLAGSSILLLTVVWGSCVIAGSQEFVHDSLRSNSVHRSLKVLLTGCGIVTDLETSYTARIMVFSVIPLAIMQIPTFFQFSSGPRSMTLVVALVISTIFLLLYFIYQIFEPWVQKRRLEYVKHDHLILRILEHVQKNTLQRILTKNGTPNVSAIRRLYREIDPEGSSGISAAKVKDLLLRNKVTETNMDEEKEIKEVLEIFDLDGDQKITREEFVSGFTKWLDQTKHALDKQYFSRKSLKEIYQVFGPWIENKRKEHEGKKQLISEILRHVQSEMVGNLLTADGKPNEYAIRRLFEKIDSNRDNCISHSELRELIMNIKFVKFSMEVEEAVALVIEELDLDKDRIINEEEFVAGFQKWLSSTSAPAIESDSESQEDIYQTWEEADMVVEEKQSKAVIDKSLWAWFKAITYVVLGIAMLSILAEPLIESVHNFSNSAGLHPFFISFILVPLATNAREATSAIKEAKHKKPRTISLAISEIYGGVFMNNILGFFALSVLIYVREITWEFSAELLVVAIVCAITGLTASFHSIFPLWSSFCAILLYPLSLVLVFVLDHVLNYN* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0436 853 Pfam EF-hand domain pair 581 648 IPR002048 GO:0005509
Apr2g0436 853 Gene3D - 511 651 - -
Apr2g0436 853 CDD EFh 447 512 IPR002048 GO:0005509
Apr2g0436 853 ProSiteProfiles EF-hand calcium-binding domain profile. 584 614 IPR002048 GO:0005509
Apr2g0436 853 ProSitePatterns EF-hand calcium-binding domain. 632 644 IPR018247 -
Apr2g0436 853 CDD EFh 584 649 IPR002048 GO:0005509
Apr2g0436 853 ProSitePatterns EF-hand calcium-binding domain. 592 604 IPR018247 -
Apr2g0436 853 ProSiteProfiles EF-hand calcium-binding domain profile. 619 654 IPR002048 GO:0005509
Apr2g0436 853 SUPERFAMILY EF-hand 445 655 IPR011992 -
Apr2g0436 853 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 693 852 - -
Apr2g0436 853 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 535 668 - -
Apr2g0436 853 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 164 528 - -
Apr2g0436 853 SMART efh_1 583 611 IPR002048 GO:0005509
Apr2g0436 853 SMART efh_1 486 514 IPR002048 GO:0005509
Apr2g0436 853 SMART efh_1 623 651 IPR002048 GO:0005509
Apr2g0436 853 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 535 668 - -
Apr2g0436 853 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 693 852 - -
Apr2g0436 853 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 164 528 - -
Apr2g0436 853 Pfam Sodium/calcium exchanger protein 702 844 IPR004837 GO:0016021|GO:0055085
Apr2g0436 853 Gene3D - 404 510 - -
Apr2g0436 853 ProSiteProfiles EF-hand calcium-binding domain profile. 482 517 IPR002048 GO:0005509
Apr2g0436 853 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0436 Apr-Chr2 5068425 5075469 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0436 535 853 EF-hand Containing Proteins AT1G53210 40.483 4.82e-69 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0436 - - aprc:113855499 1666.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0436 2 5068425 5075469 Apr2g0436 2 5068425 5075469 ECH