Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0401 ATGGTAGATAGTTCTCACTTTTCAGTGATGGGATTCTTAAACTTAGAGAAGAAATGGTTGTTTCCTCTCATTCTGTGTTCTGCGGTATGCATGCTCCTTCTAGTAACATCCTTCAACATGGGTCTTGTCTCTTCAACTCATTCCATCAATTCACTATTCTTTTTTCTCCCATCTCATTTACGATCGAACCAAACTGCGCCGTTTTTTGTGGAGAAGAAGAGTTCTCCTGCTCCAGCTCCTGCTAGGCCTGCAATTCCTCGTTTTGCATATTTGATTTCTGGCTCCAAAGGCGATTTGGAAAAGCTTTGGAGAACTCTTCATGCACTATATCATCCACTAAACCATTATGTTGTTCATTTGGACCTCGAATCCCCACTTGAGGAAAGGATGGAGCTTGCACATAGAATTGAAAGACAGCATGTCTTTGCTGAGGTTGGAAACGTTTATGTAATTACAAAGGCTAACATGGTCACTTATAGAGGACCAACGATGGTTGCTAATACTCTTCATGCCTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACTCAGGATGAACTACTACATGCTTTTTCAGATTTAGATAGATGCCTTAACTTCATTGAGCACACAAGTCGGTTAGGATGGAAACTAGATAAACGAGCAATGCCTTTAATTGTAGACCCAGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTCAATCCTAAGAGAACTTTACCAGATGCTTTTAAACTATTCACTGGTTCAGCATGGATGGTATTATCACACGAATTTGTTGAATATGTAATCTGGGGATGGGATAATCTACCAAGGACACTTCTCATGTACTACACTAATTTTGTTTCTTCCCCTGAAGGCTACTTTCAAACTGTTGCATGCAATGTGCCTGAATTAGCTAAAACTCTTGTCAATAGTGACATGCATTTTATTGCCTGGGACAACCCTCCTAAGCAGCACCCTCATGTCCTTAATATCAATGACACAGACAAAATGATTGAAAGTGGTGCTGCCTTTGCTAGAAAATTTAATCAAGATGACCCTGCCTTGGATTTGATTGATAAAAAGTTGCTCCATAGGAGAAATGGACTATTTCCTCTCGGCGGTTGGTGCACGGGTAAGCCCAAATGTTCTGAGATTGGGAACATTTATAAACTCAAACCTGGTCCTGGATCTGAAAGGCTTCATCGCTTCGTAGCTGAGCTAATTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAG 1290 0.407 MVDSSHFSVMGFLNLEKKWLFPLILCSAVCMLLLVTSFNMGLVSSTHSINSLFFFLPSHLRSNQTAPFFVEKKSSPAPAPARPAIPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHLDLESPLEERMELAHRIERQHVFAEVGNVYVITKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDELLHAFSDLDRCLNFIEHTSRLGWKLDKRAMPLIVDPGLYMSTKSDVFWVNPKRTLPDAFKLFTGSAWMVLSHEFVEYVIWGWDNLPRTLLMYYTNFVSSPEGYFQTVACNVPELAKTLVNSDMHFIAWDNPPKQHPHVLNINDTDKMIESGAAFARKFNQDDPALDLIDKKLLHRRNGLFPLGGWCTGKPKCSEIGNIYKLKPGPGSERLHRFVAELILKAKSGEDQCK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0401 429 PANTHER OS01G0201100 PROTEIN 13 429 - -
Apr2g0401 429 Pfam Core-2/I-Branching enzyme 88 347 IPR003406 GO:0016020|GO:0016757
Apr2g0401 429 PANTHER GLYCOSYLTRANSFERASE 13 429 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0401 Apr-Chr2 4690085 4693581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0401 10 429 Glycosyltransferase AT3G15350 66.981 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0401 - - gmx:100776045 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0401 2 4690085 4693581 Apr2g0401 2 4690085 4693581 ECH