Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0388 ATGGAGGAGCAGGAAGAGCAGCATCTACAGATTCCCGAAACCTTCGTCTACGAAACTCTTAGTCCACTCTCTCTCTCCGCCGCTTCCGCCGACGAGTCTCCAGTTTCCGACCACCGCGAACCCTACTCAGTTTTCCGCAATGAGATTTCCTTATCCACTGTCCAATGCCCTTCGTCCGATTCCATCGCTCCTGATTTCTTCTCCCTCGATGTCGCTGGCGAAGCTCCCGGCCAAGACTCCTACCCCGAGCTGGTCGCCGCACCCGAGCCGAAAACGCCTGCTCTCGCGTCGGAGTCGAGGCTCGAGAGCGGTTGGTTTCGCGGCAACTGCAAATTCAGGAGTCCCATGCTTCAGCTACATAAAGAGATAGTGGATTTTTGTGAATTTTTGTCACCCACTCCAGAAGAGAAAGCTGCACGAGACCTTGCTATAGTATCTGTATTTGAAGTTCTAAAACATATTTGGCCTCACTGCCAGGTGGAAGTTTTTGGGTCTTTCAGGACAGGGCTGTACCTTCCAACTAGTGATATCGATGTTGTGATTCTGAAATCAGGCTTGCCAAATCCACAGATTGGCTTGAATGCAATTTCTAGAGCATTATCACAAAGGGGCATGGCTAAAAAGATTCAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAGGAGTGGTGTTGCATTTGATATAAGTTTTGACATAGACAATGGACCCAAAGCTGCTGATTTTATTCAGGAAGCAGTGGTTAAATGGCCACCACTAAGGCCACTGTGTTTGATTTTGAAAGTATTTTTGCAGCAAAGAGAACTAAATGAGGTTTATTCTGGTGGGATTGGTTCTTATGCCCTCCTTACGATGCTGATGGCAATGTTGCGGAATCTGCGCCTGGGCCAAGCTTCTGTGGAGCACAACCTGGGGGTCCTTTTGGTTCATTTTTTTGATTTCTATGGACGCAAATTGAACACGTCAGACGTTGGTGTGTCTTGTAATGGGGCAGGCACTTTTTTCTTGAAGAGTACTAAGGGGTTTTCAACCAAAGGGCGGGGTTTTCTTATTGGCATTGAGGATCCACAGGCACCAGAGAATGACATTGGGAAGAACTCCTTTAATTATTTCCAGATTAGGTCAGCTTTTGCAATGGCTTTCTCAACTTTGACAAATCCCAAGATCATCATGAGCTTAGGACCGAATAGGAGCATTCTTGGCACTATAATTAGACCAGACCCTGTCTTGCTAGAGCGTAAAGGGGGTTTGAACGGGGATGTGACTTTTGACAGCTTGCTTCCTGGTGCTGGTGAGCCATTACAACAACAGTATGGAGATCAGGATATGTTATGCAATTGGCAGTTAGATTATGAAGATGAGCCACTGCCACGGGGAATTGACACTAGTGCAGAGCCTAGCTCACGCTCTTCAACAAAGAAGAGAAAATCTGCATCAAAGGAGAAATCTAGTAAGAAGCTAAAGGAAAACGGGGATTTTAGGATGATCAGGAATGAGAAGAATGACACTAGAAAAGAGAAGAGTATAAAAAAGAAAAGACAGAGAAAACCACTCCTTGGTGATCCATGGGTTTAG 1587 0.4575 MEEQEEQHLQIPETFVYETLSPLSLSAASADESPVSDHREPYSVFRNEISLSTVQCPSSDSIAPDFFSLDVAGEAPGQDSYPELVAAPEPKTPALASESRLESGWFRGNCKFRSPMLQLHKEIVDFCEFLSPTPEEKAARDLAIVSVFEVLKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNAISRALSQRGMAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAADFIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNLRLGQASVEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGAGTFFLKSTKGFSTKGRGFLIGIEDPQAPENDIGKNSFNYFQIRSAFAMAFSTLTNPKIIMSLGPNRSILGTIIRPDPVLLERKGGLNGDVTFDSLLPGAGEPLQQQYGDQDMLCNWQLDYEDEPLPRGIDTSAEPSSRSSTKKRKSASKEKSSKKLKENGDFRMIRNEKNDTRKEKSIKKKRQRKPLLGDPWV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0388 528 Pfam Cid1 family poly A polymerase 307 365 IPR002058 -
Apr2g0388 528 Gene3D Beta Polymerase, domain 2 132 240 IPR043519 -
Apr2g0388 528 SUPERFAMILY Nucleotidyltransferase 114 267 IPR043519 -
Apr2g0388 528 MobiDBLite consensus disorder prediction 459 528 - -
Apr2g0388 528 MobiDBLite consensus disorder prediction 486 510 - -
Apr2g0388 528 Pfam Nucleotidyltransferase domain 148 243 IPR002934 GO:0016779
Apr2g0388 528 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 97 507 - -
Apr2g0388 528 PANTHER POLY(A) RNA POLYMERASE 97 507 IPR045862 GO:0004652|GO:0031499|GO:0043631
Apr2g0388 528 Gene3D - 116 390 - -
Apr2g0388 528 SUPERFAMILY PAP/OAS1 substrate-binding domain 255 395 - -
Apr2g0388 528 CDD NT_PAP_TUTase 139 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0388 K03514 - gmx:100811320 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0388 2 4589185 4595529 Apr2g0388 2 4589185 4595529 ECH